ISME Commun
January 2025
Eukaryotic harmful and toxic microalgae, along with their derived toxins, pose significant threats to seafood safety, human health, and marine ecosystems. Here, we developed a novel full-length 18S rRNA database for harmful and toxic microalgae and combined metabarcoding with toxin analyses to investigate the ecological patterns of phytoplankton communities and the underlying mechanism of associated toxic microalgae risks. We identified 79 harmful and toxic species in Hong Kong's coastal waters, with dinoflagellates and diatoms representing the majority of toxic and harmful taxa, respectively.
View Article and Find Full Text PDFJ Hazard Mater
July 2025
Microplastics undergo complex physicochemical changes during aging, which traditional single-modality methods struggle to explain. We analyzed 1371 samples across seven aging types using a deep learning model integrating SEM images and FT-IR data via multimodal fusion and attention mechanisms. The model achieved 96.
View Article and Find Full Text PDFMarine mammal skin, in contact with seawater containing diverse chemicals, reflects species health and environmental quality. The contributions of natural toxins and anthropogenic contaminants to the effects of such chemical mixtures remain poorly quantified. Using skin fibroblast cells from the Indo-Pacific finless porpoise and humpback dolphin, we assessed the toxic potential of seawater extracts, focusing on cytotoxicity and intracellular reactive oxygen species (ROS) formation.
View Article and Find Full Text PDFImeta
February 2025
Shotgun metagenomics has become a pivotal technology in microbiome research, enabling in-depth analysis of microbial communities at both the high-resolution taxonomic and functional levels. This approach provides valuable insights of microbial diversity, interactions, and their roles in health and disease. However, the complexity of data processing and the need for reproducibility pose significant challenges to researchers.
View Article and Find Full Text PDFAdv Sci (Weinh)
February 2025
Microplastic pollution in terrestrial ecosystems threatens to destabilize large soil carbon stocks that help to mitigate climate change. Carbon-based substrates can release from microplastics and contribute to terrestrial carbon pools, but how these emerging organic compounds influence carbon mineralization and sequestration remains unknown. Here, microcosm experiments are conducted to determine the bioavailability of microplastic-derived dissolved organic matter (MP-DOM) in soils and its contribution to mineral-associated carbon pool.
View Article and Find Full Text PDFSci Total Environ
December 2024
Environ Sci Technol
March 2024
Microplastic pollution, an emerging pollution issue, has become a significant environmental concern globally due to its ubiquitous, persistent, complex, toxic, and ever-increasing nature. As a multifaceted and diverse suite of small plastic particles with different physicochemical properties and associated matters such as absorbed chemicals and microbes, future research on microplastics will need to comprehensively consider their multidimensional attributes. Here, we introduce a novel, conceptual framework of the "microplastome", defined as the entirety of various plastic particles (<5 mm), and their associated matters such as chemicals and microbes, found within a sample and its overall environmental and toxicological impacts.
View Article and Find Full Text PDFISME Commun
January 2024
Microplastics alter niches of soil microbiota by providing trillions of artificial microhabitats, termed the "plastisphere." Because of the ever-increasing accumulation of microplastics in ecosystems, it is urgent to understand the ecology of microbes associated with the plastisphere. Here, we present a continental-scale study of the bacterial plastisphere on polyethylene microplastics compared with adjacent soil communities across 99 sites collected from across China through microcosm experiments.
View Article and Find Full Text PDFInnovation (Camb)
January 2024
Plastic offers a new niche for microorganisms, the plastisphere. The ever-increasing emission of plastic waste makes it critical to understand the microbial ecology of the plastisphere and associated effects. Here, we present a global fingerprint of the plastisphere, analyzing samples collected from freshwater, seawater, and terrestrial ecosystems.
View Article and Find Full Text PDFEnviron Sci Pollut Res Int
October 2023
Soil microbiota, which plays a fundamental role in ecosystem functioning, is sensitive to environmental changes. Studying soil microbial ecological patterns can help to understand the consequences of environmental disturbances on soil microbiota and hence ecosystem services. The different habitats with critical environmental gradients generated through the restoration of coal-mining subsidence areas provide an ideal area to explore the response of soil microbiota to environmental changes.
View Article and Find Full Text PDFEnviron Sci Pollut Res Int
May 2023
Constructed wetland is an ideal place for studying the effects of plants and microorganisms on the nutrient cycling and carbon-nitrogen coupling in wetland for their clear background. This study examined both bare plots and others with plants (Phragmites australis or Typha angustifolia) in constructed wetlands and vegetation and soil samples were collected to investigate the effects of plants and soil microorganisms on carbon and nitrogen content. Results showed that the soil organic carbon content was high in plots with high plant biomass, and the increase of soil organic carbon driven by plant biomass was mainly from light fraction organic carbon (LFOC).
View Article and Find Full Text PDFThe content and composition of soil organic carbon (SOC) can characterize soil carbon storage capacity, which varies significantly between habitats. Ecological restoration in coal mining subsidence land forms a variety of habitats, which are ideal to study the effects of habitats on SOC storage capacity. Based on the analysis of the content and composition of SOC in three habitats (farmland, wetland and lakeside grassland) generated by different restoration time of the farmland which was destroyed by coal mining subsidence, we found that farmland had the highest SOC storage capacity among the three habitats.
View Article and Find Full Text PDFGlobal changes such as seawater intrusion and freshwater resource salinization increase environmental stress imposed on the aquatic microbiome. A strong predictive understanding of the responses of the aquatic microbiome to environmental stress will help in coping with the "gray rhino" events in the environment, thereby contributing to an ecologically sustainable future. Considering that microbial ecological networks are tied to the stability of ecosystem functioning and that abundant and rare biospheres with different biogeographic patterns are important drivers of ecosystem functioning, the roles of abundant and rare biospheres in maintaining ecological networks need to be clarified.
View Article and Find Full Text PDFMicroplastics are sometimes considered not harmful at environmentally relevant concentrations. Yet, such studies were conducted under standard thermal conditions and thereby ignored the impacts of higher mean temperatures (MT), and especially daily temperature fluctuations (DTF) under global warming. Moreover, an evolutionary perspective may further benefit the future risk assessment of microplastics under global warming.
View Article and Find Full Text PDFPollution of atmospheric particulate matter carrying heavy metals has posed a great threat to various ecosystem compartments. Here, a total of 540 samples from four ecosystem compartments (plant leaves, foliar dust, surface soil, and subsoil) were collected in urban soil-plant systems to characterize the heavy metal concentration and composition of foliar dust, to verify the suitability of foliar dust as an environmental monitor, and to explore the importance of foliar dust in shaping the heavy metal composition in plant leaves. We found that the concentrations of all detected elements (lead, zinc, copper, chromium, nickel, and manganese) in foliar dust were the highest among the four ecosystem compartments.
View Article and Find Full Text PDFEnviron Sci Pollut Res Int
January 2022
The strategy of the Silk Road Economic Belt in China has promoted the urban development of the backward regions in the west, but it might also cause serious eco-environmental concerns. Studying the coupling relationship between urbanization and the eco-environment (UEE) is essential to promote the sustainable development in backward regions. This study developed a combined method of coupling coordination degree (CCD) model, linear regression, and gray relational analysis (GRA) model to investigate the spatio-temporal coupling relationship and the influencing factors between UEE in Ningxia Hui Autonomous Region (NHAR), a typical backward region along the Silk Road Economic Belt.
View Article and Find Full Text PDFMicroplastics provide a unique habitat for microorganisms, forming the plastisphere. Yet the ecology of the plastisphere, including the microbial composition, functions, assembly processes, and interaction networks, needs to be understood. Here, we collected microplastics and their surrounding water samples in freshwater and seawater ecosystems.
View Article and Find Full Text PDFNon-small-cell lung cancer (NSCLC) remains a huge obstacle to human health. Certain circular RNAs endow with crucial regulatory roles in NSCLC progression. Here, we investigated the functional effects of circ_0001821 on cellular behaviors of NSCLC cells and explored the possible mechanism.
View Article and Find Full Text PDFWetlands are vulnerable to plant invasions and the decomposition of invasive plant litter could make impacts on the ecosystem services of wetlands including nutrient cycle and carbon sequestration. However, few studies have explored the effects of nutrient enrichment and water level change on the decomposition of invasive plant litter. In this study, we conducted a control experiment using the litterbag method to compare the decomposition rates and nutrient release in the litter of an invasive plant Alternanthera philoxeroides in three water levels and two nutrient enrichment treatments.
View Article and Find Full Text PDFEnviron Sci Pollut Res Int
September 2021
Whether natural wetlands serve as the source or sink of greenhouse gases (GHGs) remains uncertain. Wetlands in China are diverse in type and abundant in quantity and differ greatly in spatial distribution, environmental conditions, and GHG fluxes. However, few studies focused on the differences in GHG emissions from different types of natural wetlands.
View Article and Find Full Text PDFMicroplastics have been detected in various environments, yet the differences between microplastics in different environments are still largely unknown. Scientists have proposed the concept of the "microplastic cycle," but the evidence for the movement of microplastics between different environments is still scarce. By screening the literature and extracting information, we obtained microplastic data from 709 sampling sites in freshwater, seawater, freshwater sediment, sea sediment, and soil in China.
View Article and Find Full Text PDFSci Total Environ
January 2021
Organic carbon sources apportionment in river sediments is crucial to the output management of organic carbon. We conducted a source apportionment of sediment organic carbon in four rivers in Shaanxi Province, China, with a novel method that combined environmental scanning electron microscopy and energy dispersive X-ray spectrometry (ESEM-EDAX), principal component analysis (PCA), 16S rRNA sequencing, microbial community metabolic prediction, and positive matrix factorization (PMF). According to the ESEM-EDAX results, the sources of light fraction organic carbon (LFOC) were the vegetation residues and the organic carbon adsorbed on them; and the source of heavy fraction organic carbon (HFOC) was organic carbon wrapped in particles.
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