Publications by authors named "Linlin Qi"

Very long-chain fatty acids (VLCFAs), being constituents of different types of lipids, are critical factors in plant development, presumably due to their impact on the endomembrane system. The VLCFAs are synthesized in the endoplasmic reticulum by a heterotetrameric enzymatic complex including β-ketoacyl CoA reductase 1 (KCR1), whose mutant is lethal. Here, we describe the ectopic shoot meristems (esm) mutant, a viable kcr1 allele presumably affecting surface properties of the KCR1 protein.

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Background: There are many complex types of anterior mediastinal lesions, and preoperative differential diagnosis is difficult in clinical practice. This study aimed to explore the incidence of different anterior mediastinal lesions and their differential diagnosis based on clinical and imaging features.

Methods: We examined the local incidence of anterior mediastinal lesions and their different types in 2,626 patients with anterior mediastinal lesions.

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Background: The development of growth prediction models for multiple pulmonary ground-glass nodules (GGNs) could help predict their growth patterns and facilitate more precise identification of nodules that require close monitoring or early intervention. Previous studies have demonstrated the indolent growth pattern of GGNs and developed growth prediction models; however, these investigations predominantly focused on solitary GGN. This study aimed to investigate the natural history of multiple pulmonary GGNs and develop and validate growth prediction models based on computed tomography (CT) features, radiomics, and deep learning (DL) as well as compare their predictive performances.

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Biosensor-based droplet microfluidic high-throughput screening is extensively utilized in engineering microbial cell factories for the efficient production of various natural products. Under ideal conditions, biosensors detect product concentrations in the environment and emit corresponding measurable signals. However, bacteria cell growth rates and gene expression are significantly regulated in response to fluctuating environments, leading to substantial heterogeneity in cell density and gene expression among different subpopulations.

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The phytohormone auxin (Aux) is a principal endogenous developmental signal in plants. It mediates transcriptional reprogramming by a well-established canonical signalling mechanism. TIR1/AFB auxin receptors are F-box subunits of an ubiquitin ligase complex; after auxin perception, they associate with Aux/IAA transcriptional repressors and ubiquitinate them for degradation, thus enabling the activation of auxin response factor (ARF) transcription factors.

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Background: Lung adenocarcinoma (LUAD) is a sub-type of non-small cell lung cancer (NSCLC) that is often associated with genetic alterations, including the Kirsten rat sarcoma viral oncogene homolog () mutation. The mutation is particularly challenging to treat due to resistance to targeted therapies. This study aims to develop a predictive model for the mutation in patients with LUAD by integrating clinical, dual-energy spectral computed tomography (DESCT), and radiomics features.

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Background: Patients with pulmonary subsolid nodules (SSNs) of ≤ 2 cm in diameter and a consolidation to tumor ratio (CTR) of ≤ 0.25 have good postoperative prognoses, but their management remains controversial.

Research Question: Does upfront surgical intervention lead to higher survival than watchful waiting in patients with SSNs with diameter of ≤ 2 cm and CTR of ≤ 0.

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Colloids play a crucial role in influencing the mobility of radionuclides in high-level radioactive waste repositories. However, the co-transport behavior of radionuclides and colloids in geological media remains insufficiently understood. This study investigated the transport of Strontium (Sr) in four types of granite minerals (quartz, biotite, K-feldspar, and plagioclase) in the presence and absence of Na-bentonite colloids (Na-BC) using column experiments.

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Background: Although low-dose computed tomography (LDCT) screening effectively reduces LC mortality in high-risk individuals with a history of smoking in China, the feasibility and efficacy of lung cancer screening (LCS) in individuals who never smoked versus individuals who smoked remains unclear.

Methods: We conducted a retrospective analysis of prospective cohort studies at the National Cancer Center (NCC) in China from January 2006 to December 2022. A comprehensive LCS initiative was undertaken, involving 30,468 participants (54.

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Background: The prognostic predictors of the synchronous multiple primary lung cancer (SMPLC) still remain unclear, and there is a lack of studies on the prognosis of SMPLC patients excluding those with multifocal ground-glass/lepidic (GG/L) nodules. The aim of this study is to develop an effective model for predicting survival of SMPLC patients.

Methods: In this multicenter cohort study, a total of 831 SMPLC patients presenting for lung cancer resection from January 2004 to January 2018 at five institutions were included for developing and validating a nomogram model.

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Background: Follow-up management of pulmonary nodules is a crucial component of lung cancer screening. Consistency in follow-up recommendations is essential for effective lung cancer screening. This study aimed to assess inter-observer agreement on National Comprehensive Cancer Network (NCCN) guideline-based follow-up recommendation for subsolid nodules from low-dose computed tomography (LDCT) screening.

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Background: Distinguishing benign from malignant sub-centimeter solid pulmonary nodules (SSPNs) continues to be challenging in clinical practice. Earlier diagnosis is crucial for improving patient survival and prognosis. This study aimed to investigate the risk factors of malignant SSPNs and establish and validate a prediction model based on computed tomography (CT) characteristics to assist in their early diagnosis.

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Article Synopsis
  • The study aimed to analyze the radiological characteristics of primary pulmonary invasive mucinous adenocarcinoma (IMA) to enhance understanding and improve initial diagnostic accuracy.
  • Researchers reviewed data from 312 patients with confirmed IMA, categorizing tumors based on morphology and density, and used statistical tests for analysis.
  • Findings indicated that IMA mostly occurs in older women, predominantly in the lower lung lobe, with regular nodule/mass and solid types being the most common, and identified key radiological features that can help differentiate IMA from other conditions.
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The distribution coefficient (K) of radionuclides is a crucial parameter in assessing the safety of high-level radioactive waste (HLW) geological repository. It is determined in the laboratory through batch and column experiments. However, differences in obtained K values from distinct experiments have not been thoroughly assessed and compared.

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The development of multicellular tissues requires both local and global coordination of cell polarization, however, the mechanisms underlying their interplay are poorly understood. In Arabidopsis, leaf epidermal pavement cells (PC) develop a puzzle-piece shape locally coordinated through apoplastic auxin signaling. Here we show auxin also globally coordinates interdigitation by activating the TIR1/AFB-dependent nuclear signaling pathway.

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Article Synopsis
  • Researchers studied how well different lung cancer screening guidelines work for people in China from 2005 to 2022.
  • They looked at nearly 32,000 people and found 298 had lung cancer, comparing four guidelines: China’s, NCCN, USPSTF, and I-ELCAP.
  • The results showed that different guidelines let different amounts of people qualify for screening, and some might miss more cancer cases than others, especially in younger age groups.
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Background: Preoperative differentiation of the types of mediastinal tumors is essential. Magnetic resonance (MR) elastography potentially provides a noninvasive method to assess the classification of mediastinal tumor subtypes.

Purpose: To evaluate the use of MR elastography in anterior mediastinal masses and to characterize the mechanical properties of tumors of different subtypes.

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Background: The prognostic analysis of lung invasive mucinous adenocarcinoma (IMA) is deficient due to the lack of a universally recommended histological grading system, leading to unregulated treatment approaches.

Objective: We aimed to examine the clinical trajectory of IMA and assess the viability of utilizing the existing grading system for lung invasive non-mucinous adenocarcinoma in the context of IMA.

Methods: We retrospectively collected clinicopathological data from 265 IMA patients.

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Bacterial infections trigger a multifaceted interplay between inflammatory mediators and redox regulation. Recently, accumulating evidence has shown that redox signaling plays a significant role in immune initiation and subsequent immune cell functions. This review addresses the crucial role of the thioredoxin (Trx) system in the initiation of immune reactions and regulation of inflammatory responses during bacterial infections.

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Article Synopsis
  • This study aimed to develop a deep learning model to differentiate benign from malignant subcentimeter solid pulmonary nodules (SSPNs) using CT images, addressing challenges in diagnosis.
  • The research involved a retrospective analysis of patients with confirmed SSPNs, employing a self-supervised model trained on existing databases and later fine-tuned with an internal dataset.
  • Results showed the model performed well, with high accuracy, sensitivity, and specificity in both internal and external testing cohorts, suggesting it could enhance patient management in clinical settings.
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The ability to manipulate the self-assembly of proteins is essential to understanding the mechanisms of life and beneficial to fabricating advanced nanomaterials. Here, we report the transformation of the MS2 phage capsid from nanocages to nanotubes and then to nanotube hydrogels through simple point mutations guided by interfacial interaction redesign. We demonstrate that site 70, which lies in the flexible FG loop of the capsid protein (CP), is a "magic" site that can largely dictate the final morphology of assemblies.

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Objective: To determine whether quantitative parameters of detector-derived dual-layer spectral computed tomography (DLCT) can reliably identify epidermal growth factor receptor (EGFR) mutation status in patients with non-small cell lung cancer (NSCLC).

Methods: Patients with NSCLC who underwent arterial phase (AP) and venous phase (VP) DLCT between December 2021 and November 2022 were subdivided into the mutated and wild-type EGFR groups following EGFR mutation testing. Their baseline clinical data, conventional CT images, and spectral images were obtained.

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