Publications by authors named "Chenjie Fei"

Palmitoylation, a reversible post-translational modification, regulates a wide range of cellular processes by modulating protein localization, stability, and interactions. The zinc finger Asp-His-His-Cys (zDHHC) family of palmitoyltransferases is central to this process, yet their functions in immune cell death of lower vertebrates, remain poorly understood. Here, we investigate the role of zDHHC8 in modulating immune responses and necroptosis during infection in large yellow croaker (LczDHHC8).

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Antimicrobial peptides (AMPs) represent an evolutionarily conserved component of innate immunity with broad-spectrum antimicrobial and antiviral activities. However, the antiviral potential of fish-specific piscidins against emerging aquatic viruses largely remains to be explored. In this study, we evaluated the antiviral properties of three piscidins (designated here as Piscidin1, Piscidin2 and Piscidin3) identified from largemouth bass () against rhabdovirus (MSRV), a major pathogen causing high mortality in farmed largemouth bass.

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General paresis is a rare type of syphilis characterized by progressive cognitive impairment and psychiatric syndromes. It is often misdiagnosed because of its rarity and similarity to other diseases. We aimed to investigate the clinical, radiological, pathological and prognostic features of general paresis comprehensively and to compare it with other dementias.

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Background: Loneliness and social isolation are serious yet underappreciated public health problems, with their genetic underpinnings remaining largely unknown. We aimed to explore the role of protein-coding variants in the manifestation of loneliness and social isolation.

Methods: We conducted the first exome-wide association analysis on loneliness and social isolation, utilizing 336,115 participants of white-British ancestry for loneliness and 346,115 for social isolation.

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NLRP3 inflammasome activation is pivotal for cytokine secretion and pyroptosis in response to diverse stimuli, playing a crucial role in innate immunity. While extensively studied in mammals, the regulatory mechanisms governing NLRP3 activation in non-mammalian vertebrates remain largely unexplored. Teleosts, as basal vertebrates, represent an ideal model for exploring the evolutionary trajectory of inflammasome regulation.

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Apoptosis, a form of programmed cell death, is essential for maintaining homeostasis within the internal environment. Caspase-8, an initiator caspase, plays a pivotal role in activating the caspase cascade during the apoptotic process. This study cloned and expressed Caspase-8 from goldfish, aimed to investigate the role of Caspase-8 in the immune response of fish to bacterial infections, specifically those caused by Aeromonas hydrophila.

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Article Synopsis
  • Existing research on neuroticism primarily focused on common genetic variants, but this study examines rare coding variants through a large exome analysis in white British individuals from UK Biobank.
  • The analysis identified 14 genes associated with neuroticism, including 12 novel genes and 2 that have previously shown links with common variants, with a heritability estimate of 7.3% for rare variants.
  • The study also found 78 significant associations with common variants, implicating 6 new genes, and demonstrated widespread effects on neuropsychiatric disorders and cognitive abilities, highlighting potential targets for future research.
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  • Previous studies on depression focused mainly on common genetic variants, but this research uses whole-exome sequencing to explore rare coding variants and their effects on depression.
  • A large-scale study involving 296,199 UK Biobank participants found 22 genes linked to depressive symptoms, including six new ones (TRIM27, UBD, SVOP, ADGRB2, IRF2BPL, and ANKRD12).
  • The study revealed that these genes are connected to immune responses and regions of the brain tied to depression, offering new insights into the genetic factors and mechanisms behind depressive symptoms.
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NLRP3 inflammasome activation, essential for cytokine secretion and pyroptosis in response to diverse stimuli, is closely associated with various diseases. Upon stimulation, NLRP3 undergoes subcellular membrane trafficking and conformational rearrangements, preparing itself for inflammasome assembly at the microtubule-organizing center (MTOC). Here, we elucidate an orchestrated mechanism underlying these ordered processes using human and murine cells.

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Article Synopsis
  • - The study examined the genetic links of protein-coding variants to immune-mediated diseases (IMDs) by analyzing whole exome sequencing data from over 350,000 UK Biobank participants and discovered 162 unique genes across 35 IMDs, with 124 of those being previously unknown.
  • - Key genes, including FLG associated with atopic dermatitis and asthma, were found to influence both rare and common genetic variants, while 91 genes significantly affected health outcomes over time.
  • - The research also revealed five causal genes that correspond to approved drug targets and highlighted how mutations in certain genes might impact protein expression related to various IMDs, ultimately suggesting new avenues for targeted therapies.
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  • Varicose veins (VV) are common, and their genetic causes remain unclear, prompting a study using whole-exome sequencing from the UK Biobank.
  • The study identified 36 common genetic variants linked to VV across 34 genes and three rare variants, with PIEZO1 showing the strongest association.
  • Findings suggest that genes related to VV are also connected to factors like body size and inflammation, indicating potential new avenues for treatment.
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Zinc finger Asp-His-His-Cys motif-containing (zDHHC) proteins, known for their palmitoyltransferase (PAT) activity, play crucial roles in diverse cellular processes, including immune regulation. However, their non-palmitoyltransferase immunomodulatory functions and involvement in teleost immune responses remain underexplored. In this study, we systematically characterized the zDHHC family in the large yellow croaker (), identifying 22 members.

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Previous genetic studies of venous thromboembolism (VTE) have been largely limited to common variants, leaving the genetic determinants relatively incomplete. We performed an exome-wide association study of VTE among 14,723 cases and 334,315 controls. Fourteen known and four novel genes (SRSF6, PHPT1, CGN, and MAP3K2) were identified through protein-coding variants, with broad replication in the FinnGen cohort.

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Sleep is vital for human health and has a moderate heritability. Previous genome-wide association studies have limitations in capturing the role of rare genetic variants in sleep-related traits. Here we conducted a large-scale exome-wide association study of eight sleep-related traits (sleep duration, insomnia symptoms, chronotype, daytime sleepiness, daytime napping, ease of getting up in the morning, snoring and sleep apnoea) among 450,000 participants from UK Biobank.

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Lysine-specific demethylase 4 A (KDM4A, also named JMJD2A, KIA0677, or JHDM3A) is a demethylase that can remove methyl groups from histones H3K9me2/3, H3K36me2/3, and H1.4K26me2/me3. Accumulating evidence suggests that KDM4A is not only involved in body homeostasis (such as cell proliferation, migration and differentiation, and tissue development) but also associated with multiple human diseases, especially cancers.

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  • NK-lysin (NKL) is an antimicrobial peptide identified in black scraper fish, showing strong antibacterial properties and expressed primarily in gills.
  • Researchers cloned the cDNA of NKL, revealing a 150-amino-acid polypeptide with a surfactant protein B domain and demonstrated that two synthesized peptides maintained antibacterial activity without disulfide bonds.
  • Studies indicated that TmNKL significantly reduced bacterial load in infected fish, suggesting its effectiveness as a defense mechanism against bacteria like Vibrio parahaemolyticus.
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The innate immune system protects the host from external pathogens and internal damage in various ways. The cGAS-STING signaling pathway, comprised of cyclic GMP-AMP synthase (cGAS), stimulator of interferon genes (STING), and downstream signaling adaptors, plays an essential role in protective immune defense against microbial DNA and internal damaged-associated DNA and is responsible for various immune-related diseases. After binding with DNA, cytosolic cGAS undergoes conformational change and DNA-linked liquid-liquid phase separation to produce 2'3'-cGAMP for the activation of endoplasmic reticulum (ER)-localized STING.

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An outbreak of white spot syndrome virus (WSSV) can hit shrimp culture with a devastating blow, and there are no suitable measures to prevent infection with the virus. In this study, the activity of active molecules from Chinese herbs against WSSV was evaluated and screened. Taxifolin had the highest rate (84%) of inhibition of the WSSV infection.

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Microplastics (MPs) are normally defined as small plastic wastes with a size of 1 μm to 5 mm in diameter. This tiny plastic debris is abundant in aquatic systems and poses a great threat to aquatic biota. To date, toxicological assessment of MPs is predominantly dependent on metazoan animals, although their applications are sometimes limited due to the high cost, narrow ecological niche, or ethical considerations.

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Ladderlectin is a member of C-type lectins (CTLs) in teleost fish and involved in innate immune defense. In this study, ayu (Plecoglossus altivelis) ladderlecin-like (PaLL-like) sequence was cloned, which encodes a polypeptide of 172 amino acids that includes a signal peptide and characteristic C-type lectin-like domains (CTLDs). Phylogenetically, PaLL-like was most closely related to its teleost counterpart from shishamo smelt (Spirinchus lanceolatus).

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Article Synopsis
  • Breast cancer (BC) is the most commonly diagnosed cancer globally since 2020, and histone methylation plays a significant role in its development.
  • Lysine-specific demethylase 1 (LSD1) is a key enzyme that removes methyl groups from histones and is implicated in cancer progression, particularly in breast cancer through various mechanisms.
  • The review discusses LSD1's structure, its mechanisms of action in breast cancer, the potential of LSD1 inhibitors as a treatment, and the future challenges and opportunities in targeting LSD1 for BC therapy.
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With the rapid development of intensive farming, the aquaculture industry uses a great many antibiotics for the prevention and treatment of bacterial diseases. Despite their therapeutic functions, the overuse and accumulation of antibiotics also pose a threat to aquaculture organisms. In the present study, ayu ( ) was used as a fish model to study the impacts of ciprofloxacin (CIP) overuse on intestinal homeostasis and immune response during subsequent infection.

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The peroxisome proliferator-activated receptor gamma (PPARγ) are nuclear receptors with distinct roles in energy metabolism and immunity. Although extensively studied in mammals, immunomodulatory roles of this molecule in teleost fish remain to be investigated. In this study, large yellow croaker (Larimichthys crocea) PPARγ (LcPPARγ) sequence was cloned, which encodes a polypeptide of 541 amino acids that include signature domains belonging to the nuclear receptor superfamily.

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Advances in flow cytometry have allowed for innovative functional investigations of innate immune cell responses. Imaging flow cytometers combine the imaging capabilities of microscopy with rapid, high-throughput data acquisition attributes of standard flow cytometers. Here, we describe a detailed method for co-expressing stimulatory and inhibitory immunoregulatory receptor-types in AD293 cells and then measuring receptor cross-talk during the regulation of the phagocytic response.

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Akin to their mammalian counterparts, teleost fish possess a complex assortment of highly specialized immune cells that are capable of unleashing potent innate immune responses to eradicate or mitigate incoming pathogens, and also differentiate into memory lymphocytes to provide long-term protection. Investigations into specific roles and functions of fish immune cells depend on the precise separation of each cell type. Commonly used techniques, for example, density gradient centrifugation, rely on immune cells to have differing sizes or densities and thus fail to separate between similar cell types (e.

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