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Alternation of generations between a sporophytic and gametophytic developmental stage is a feature common to all land plants. This review will discuss the evolutionary origins of these two developmental programs from unicellular eukaryotic progenitors establishing the ability to switch between haploid and diploid states. We will compare the various genetic factors that regulate this switch and highlight the mechanisms which are involved in maintaining the separation of sporophytic and gametophytic developmental programs. While haploid and diploid stages were morphologically similar at early evolutionary stages, largely different gametophyte and sporophyte developments prevail in land plants and finally allowed the development of pollen as the male gametes with specialized structures providing desiccation tolerance and allowing long-distance dispersal. Moreover, plant gametes can be reprogrammed to execute the sporophytic development prior to the formation of the diploid stage achieved with the fusion of gametes and thus initially maintain the haploid stage. Upon diploidization, doubled haploids can be generated which accelerate modern plant breeding as homozygous plants are obtained within one generation. Thus, knowledge of the major signaling pathways governing this dual ontogeny in land plants is not only required for basic research but also for biotechnological applications to develop novel breeding methods accelerating trait development.
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http://dx.doi.org/10.3389/fpls.2021.789789 | DOI Listing |
Theor Appl Genet
September 2025
Queensland Alliance for Agriculture and Food Innovation, University of Queensland, Brisbane, Australia.
Stacking desirable haplotypes across the genome to develop superior genotypes has been implemented in several crop species. A major challenge in Optimal Haplotype Selection is identifying a set of parents that collectively contain all desirable haplotypes, a complex combinatorial problem with countless possibilities. In this study, we evaluated the performance of metaheuristic search algorithms (MSAs)-genetic algorithm (GA), differential evolution (DE), particle swarm optimisation (PSO), and simulated annealing (SA) for optimising parent selection under two genotype building (GB) objectives: Optimal Haplotype Selection (OHS) and Optimal Population Value (OPV).
View Article and Find Full Text PDFMol Phylogenet Evol
September 2025
School of Ecology and Environmental Science, Yunnan Key Laboratory of Plant Reproductive Adaptation and Evolutionary Ecology and Institute of Biodiversity, School of Life Sciences, Yunnan University, Kunming 650504 Yunnan, China. Electronic address:
The advent of high-throughput genomic sequencing has provided unprecedented access to genome-scale data. This deluge of data has yielded new insights into phylogenetic relationships across the tree of life. However, incongruent results arising from different data partitions or from the use of different analyses have often been overlooked or insufficiently explored.
View Article and Find Full Text PDFPlant J
September 2025
Université de Strasbourg, CNRS, IBMP UPR 2357, Strasbourg, France.
Trimethylation of histone H3 at lys36 (H3K36me3) promotes gene transcription and governs plant development and plant responses to environmental cues. Yet, how H3K36me3 is translated into specific downstream events remains largely uninvestigated. Here, we report that the Arabidopsis PWWP-domain protein HUA2 binds methyl-H3K36 in a PWWP motif-dependent manner.
View Article and Find Full Text PDFPlant J
September 2025
Rice Research Institute of Shenyang Agricultural University, Shenyang, 110 866, China.
Grain size is a crucial determinant of rice yield, yet the molecular mechanisms controlling this trait remain only partially understood. Here, we identified the JMJ720 locus as a key regulator of grain size through map-based cloning. The jmj720 mutant was found to exhibit significantly larger grains when compared to the wild type (WT).
View Article and Find Full Text PDFPlant J
September 2025
National Key Laboratory of Green Pesticide/Guangdong Province Key Laboratory of Microbial Signals and Disease Control, South China Agricultural University, Guangzhou, 510642, China.
Tropical and subtropical fruit trees face serious threats of oomycete-caused plant diseases. However, the molecular mechanism by which oomycete pathogens suppress the immunity of these fruit trees remains largely unclear. Effectors play a crucial role in the pathogenesis of plant pathogenic oomycetes.
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