Mol Phylogenet Evol
September 2025
The advent of high-throughput genomic sequencing has provided unprecedented access to genome-scale data. This deluge of data has yielded new insights into phylogenetic relationships across the tree of life. However, incongruent results arising from different data partitions or from the use of different analyses have often been overlooked or insufficiently explored.
View Article and Find Full Text PDFBased on a comprehensive morphological and molecular data analysis, we have confirmed and described a new species within the genus , which is distributed in Sichuan Province, China. Morphologically, the new species resembles and , but it is distinctly different from them in its asymmetrical leaves, leaf apex with glands, triangular petals that are white at the base and adorned with dense purple-red stripes and spots on the surfaces upward, and rectangular nectar scales. A phylogenetic analysis utilizing four plastid markers and one nuclear marker supports the conclusion that the new species is sister to .
View Article and Find Full Text PDFThe family Onocleaceae represents a small family of terrestrial ferns, with four genera and around five species. It has a circumboreal to north temperate distribution, and exhibits a disjunct distribution between Eurasia and North America, including Mexico. Historically, the taxonomy and classification of this family has been subject to debate and contention among scholars, leading to contradictory classifications and disagreements on the number of genera and species within the family.
View Article and Find Full Text PDFPrevious studies have shown that at least six genera of the Cheilanthoideae, a subfamily of the fern family Pteridaceae, may not be monophyletic. In these non-monophyletic genera, the Old-World genus Paragymnopteris including approximately five species have long been controversial. In this study, with an extensive taxon sampling of Paragymnopteris, we assembled 19 complete plastomes of all recognized Paragymnopteris species, plastomes of Pellaea (3 species) and Argyrochosma (1 species), as well as transcriptomes from Paragymnopteris (6 species) and Argyrochosma (1 species).
View Article and Find Full Text PDFFront Plant Sci
July 2024
The unresolved phylogenetic framework within the Selaginellaceae subfamily Gymnogynoideae (ca. 130 species) has hindered our comprehension of the diversification and evolution of Selaginellaceae, one of the most important lineages in land plant evolution. Here, based on plastid and nuclear data extracted from genomic sequencing of more than 90% species of all genera except two in Gymnogynoideae, a phylogenomic study focusing on the contentious relationships among the genera in Gymnogynoideae was conducted.
View Article and Find Full Text PDFHepatobiliary Pancreat Dis Int
October 2024