Publications by authors named "Quanjun Zhang"

This study presents a comprehensive analysis of winter wheat phenological variations in China's Huang-Huai-Hai Plain (HHHP) from 1981 to 2021, leveraging data from 62 national agrometeorological observation stations. As the world's largest winter wheat production region, the HHHP contributes over 60% of China's total output, playing a pivotal role in national food security. Using kernel density estimation (KDE) and univariate linear regression, the dataset characterizes interannual trends in key phenological stages-sowing, emergence, tillering, jointing, booting, heading, flowering, milking, and maturity-along with growth period durations.

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In the context of the digital economy, enterprise digitalization represents a significant opportunity to enhance core competitiveness. Nevertheless, the digitalization of enterprises may have unanticipated effects on employee's mental health, which could impede the digital advancement of the enterprise. Such consequences may be evidenced by employee role overload and burnout, which in turn impede enterprise digitalization.

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The scale and connectivity of marine resources make them more complex than land resource management. Although digitization has been recognized as an organizational change process that can effectively improve resource efficiency and enhance network resilience, however, gaps remain in establishing the theoretical links between digitization and marine economic performance. Based on a panel fixed-effects model, this study evaluates the interrelationships and potential mechanisms of different firms with data from annual reports of listed firms in the marine economy in the eastern coastal region of China.

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Vitrification is a common technique for cryopreserving oocytes or embryos. However, manual vitrification is tedious and labor-intensive, and can be subject to variations caused by human factors. To address these challenges, we developed an automated vitrification-thawing system (AVTS) based on a cryo-handle.

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Prime editor (PE) is a versatile genome editing tool that does not need extra DNA donors or inducing double-strand breaks. However, implementation of PE remains a challenge because of its oversized composition. In this study, we screened out the smallest truncated Moloney murine leukemia virus (MMLV) reverse transcriptase (RT) with the F155Y mutation to keep gene editing efficiency.

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Article Synopsis
  • Current gene expression regulation methods can't precisely control gene expression both ways, so researchers developed a new strategy that modifies the Kozak sequence to fine-tune translation levels directly.* -
  • The study focused on editing three specific nucleotides (KZ3) upstream of the translation initiation codon, finding that different variants affect translation efficiency while transcription levels remain consistent.* -
  • This approach allows for adjustable gene translation in a predictable manner, and it can be applied to the entire Kozak sequence across all protein-coding genes in eukaryotes.*
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Floodplain lakes share characteristics of both deep and shallow lakes throughout any given year. Seasonal fluctuations in their water depth drive changes in nutrients and total primary productivity, which directly and indirectly affect submerged macrophyte biomass. To investigate how water depth and environmental variables affect submerged macrophyte biomass, we surveyed six sub-lakes in the Poyang Lake floodplain, China, during the flood and dry seasons of 2021.

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Article Synopsis
  • Cas12a can process multiple sgRNAs from a single transcript, making it valuable for multiplexed base editing of multiple genes or variants.
  • Current usage of Cas12a in base editing is limited due to efficiency issues and a narrow PAM range, but improvements have been made using Lachnospiraceae bacterium Cas12a (LbCas12a) variants.
  • The newly developed cytosine and adenine base editor systems allow efficient conversions and enable multiplexed editing in somatic cells and embryos, positioning them as important tools for genetic advancement, disease research, and gene therapy.
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Inducible expression systems are indispensable for precise regulation and in-depth analysis of biological process. Binary Tet-On system has been widely employed to regulate transgenic expression by doxycycline. Previous pig models with tetracycline regulatory elements were generated through random integration.

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Establishing saturated mutagenesis in a specific gene through gene editing is an efficient approach for identifying the relationships between mutations and the corresponding phenotypes. CRISPR/Cas9-based sgRNA library screening often creates indel mutations with multiple nucleotides. Single base editors and dual deaminase-mediated base editors can achieve only one and two types of base substitutions, respectively.

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Predictable DNA off-target effect is one of the major safety concerns for the application of cytosine base editors (CBEs). To eliminate Cas9-dependent DNA off-target effects, we designed a novel effective CBE system with dual guiders by combining CRISPR with transcription activator-like effector (TALE). In this system, Cas9 nickase (nCas9) and cytosine deaminase are guided to the same target site to conduct base editing by single-guide RNA (sgRNA) and TALE, respectively.

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Obtaining functional human cells through interspecies chimerism with human pluripotent stem cells (hPSCs) remains unsuccessful due to its extremely low efficiency. Here, we show that hPSCs failed to differentiate and contribute teratoma in the presence of mouse PSCs (mPSCs), while MYCN, a pro-growth factor, dramatically promotes hPSC contributions in teratoma co-formation by hPSCs/mPSCs. MYCN combined with BCL2 (M/B) greatly enhanced conventional hPSCs to integrate into pre-implantation embryos of different species, such as mice, rabbits, and pigs, and substantially contributed to mouse post-implantation chimera in embryonic and extra-embryonic tissues.

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Article Synopsis
  • Hydrological gradient variations in wetlands directly influence carbon storage by affecting soil nutrients and plant diversity, although the underlying mechanisms are not fully understood.
  • The study found that high-frequency wet-dry alternating zones (HFWA) had significantly higher soil nutrient levels, plant biomass, and carbon content compared to low-frequency wet-dry alternating zones (LFWA).
  • A structural equation model showed that wet-dry alternations positively correlate with both soil nutrients and plant biomass, suggesting that better water management in wetlands can boost plant growth and enhance soil carbon sequestration.
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β-thalassemia, an autosomal recessive blood disorder that reduces the production of hemoglobin, is majorly caused by the point mutation of the HBB gene resulting in reduced or absent β-globin chains of the hemoglobin tetramer. Animal models recapitulating both the phenotype and genotype of human disease are valuable in the exploration of pathophysiology and for in vivo evaluation of novel therapeutic treatments. The docile temperament, short vital cycles, and low cost of rabbits make them an attractive animal model.

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The Wiskott-Aldrich syndrome (WAS) is a severe recessive X-linked immunodeficiency resulting from loss-of-function mutations in the WAS gene. Mouse is the only mammalian model used for investigation of WAS pathogenesis. However, the mouse model does not accurately recapitulate WAS clinical phenotypes, thus, limiting its application in WAS clinical research.

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Patients with hereditary tyrosinemia type I (HT1) present acute and irreversible liver and kidney damage during infancy. CRISPR-Cas9-mediated gene correction during infancy may provide a promising approach to treat patients with HT1. However, all previous studies were performed on adult HT1 rodent models, which cannot authentically recapitulate some symptoms of human patients.

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Background: Many favorable traits of crops and livestock and human genetic diseases arise from multiple single nucleotide polymorphisms or multiple point mutations with heterogeneous base substitutions at the same locus. Current cytosine or adenine base editors can only accomplish C-to-T (G-to-A) or A-to-G (T-to-C) substitutions in the windows of target genomic sites of organisms; therefore, there is a need to develop base editors that can simultaneously achieve C-to-T and A-to-G substitutions at the targeting site.

Results: In this study, a novel fusion adenine and cytosine base editor (ACBE) was generated by fusing a heterodimer of TadA (ecTadA) and an activation-induced cytidine deaminase (AID) to the N- and C-terminals of Cas9 nickase (nCas9), respectively.

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The NLRP3 inflammasome is associated with a variety of human diseases, including cryopyrin-associated periodic syndrome (CAPS). CAPS is a dominantly inherited disease with missense mutations. Currently, most studies on the NLRP3-inflammasome have been performed with mice, but the activation patterns and the signaling pathways of the mouse NLRP3 inflammasome are not always identical with those in humans.

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Interspecies chimera through blastocyst complementation could be an alternative approach to create human organs in animals by using human pluripotent stem cells. A mismatch of the major histocompatibility complex of vascular endothelial cells between the human and host animal will cause graft rejection in the transplanted organs. Therefore, to achieve a transplantable organ in animals without rejection, creation of vascular endothelial cells derived from humans within the organ is necessary.

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