Publications by authors named "Fei Rong"

Motivation: Gene expression plays a crucial role in cell function, and enhancers can regulate gene expression precisely. Therefore, accurate prediction of enhancers is particularly critical. However, existing prediction methods have low accuracy or rely on fixed multiple epigenetic signals, which may not always be available.

View Article and Find Full Text PDF

To detect HO and redox potential of an acute wound simultaneously, a SERS-active microneedle was fabricated by integrating HO and redox potential SERS probes into two grooves of an acupuncture needle, respectively. When the SERS-active microneedle was inserted into tissues, an acute wound was formed and the two SERS probes were introduced into the wound to sense HO and redox potential of the wound. The feasibility of the SERS-active microneedle was evaluated and .

View Article and Find Full Text PDF

Silicon (Si) is regarded as a promising anode material owing to its high specific capacity and low lithiation potential. The large volume change and the pulverization of silicon during the lithiation/delithiation process hinder its direct energy storage application. This review focuses on the electrospun silicon/carbon (Si/C) nanofiber anode materials for lithium-ion batteries for long-term stable energy storage.

View Article and Find Full Text PDF

Gene Regulatory Networks (GRNs) reveal complex interactions between genes in organisms, crucial for understanding the life system's operation. The rapid development of biotechnology, especially single-cell RNA sequencing (scRNA-seq), has generated a large amount of scRNA-seq data, which can be analyzed to explore the regulatory relationships between genes at the single-cell level. Previous models used to construct GRNs mainly aim at constructing associative relationships between genes, but usually fail to accurately reveal the causality between genes.

View Article and Find Full Text PDF
Article Synopsis
  • piRNAs are small non-coding RNAs crucial for gene regulation and have potential as biomarkers and therapeutic targets for diseases, but current methods struggle to identify piRNA-disease associations from limited data.
  • A novel method named MRDPDA is proposed, which uses a deep factorization machine model alongside regularizations from multiple limited datasets to improve predictions of piRNA-disease associations.
  • MRDPDA outperforms existing methods in tests conducted on the pirpheno dataset, and further case studies confirm its effectiveness in predicting piRNA-disease relationships.
View Article and Find Full Text PDF
Article Synopsis
  • Long non-coding RNAs (lncRNAs) are RNA molecules that don't encode proteins and are similar to mRNAs; researchers developed PLEKv2 to differentiate between lncRNAs and mRNAs effectively.
  • PLEKv2 boasts a prediction accuracy of 98.7% for human datasets, outperforming several other tools by significant margins in both human and cross-species predictions.
  • The PLEKv2 model not only enhances the identification of lncRNAs in primate datasets but also extends its predictive capabilities to plant RNA sequences, making it a versatile tool for biological research; it's available for free online.
View Article and Find Full Text PDF

Almost 16 % of the global population is affected by neurological disorders, including neurodegenerative and cerebral neuroimmune diseases, triggered by acute or chronic inflammation. Neuroinflammation is recognized as a common pathogenic mechanism in a wide array of neurological conditions including Alzheimer's disease, Parkinson's disease, postoperative cognitive dysfunction, stroke, traumatic brain injury, and multiple sclerosis. Inflammatory process in the central nervous system (CNS) can lead to neuronal damage and neuronal apoptosis, consequently exacerbating these diseases.

View Article and Find Full Text PDF

Railway Point Machine (RPM) is a fundamental component of railway infrastructure and plays a crucial role in ensuring the safe operation of trains. Its primary function is to divert trains from one track to another, enabling connections between different lines and facilitating route selection. By judiciously deploying turnouts, railway systems can provide efficient transportation services while ensuring the safety of passengers and cargo.

View Article and Find Full Text PDF

Thin-film metal conductors featuring high conductivity and stretchability are basic building blocks for high-performance conformable electronics. Gallium-based liquid metals are attractive candidates for thin-film conductors due to their intrinsic stretchability and ease of processing. Moreover, the phase change nature of liquid metal provides an opportunity to create conformal electronics in a substrate-free manner.

View Article and Find Full Text PDF

The review summarizes the fabrication, microstructures, and sensor applications of highly ordered electrospun nanofibers. In the traditional electrospinning process, electrospun nanofibers usually have disordered or random microstructures due to the chaotic oscillation of the electrospinning jet. Different electrospinning methods can be formed by introducing external forces, such as magnetic, electric, or mechanical forces, and ordered nanofibers can be collected.

View Article and Find Full Text PDF

Nervonic acid, a 24-carbon fatty acid with only one double bond at the 9th carbon (C24:1n-9), is abundant in the human brain, liver, and kidney. It not only functions in free form but also serves as a critical component of sphingolipids which participate in many biological processes such as cell membrane formation, apoptosis, and neurotransmission. Recent studies show that nervonic acid supplementation is not only beneficial to human health but also can improve the many medical conditions such as neurological diseases, cancers, diabetes, obesity, and their complications.

View Article and Find Full Text PDF
Article Synopsis
  • * A patient-specific mold, made from polycaprolactone, was designed and implanted to create an artificial vaginal canal, resulting in no post-surgery discomfort and a successful postoperative outcome.
  • * Long-term follow-ups demonstrated that the vaginal canal was unobstructed, normal in appearance, and significantly improved the patient’s quality of sexual life.
View Article and Find Full Text PDF
Article Synopsis
  • - The paper presents a new method for controlling reactive power in wind farms to enhance revenue and reduce electrical losses in doubly-fed induction generator systems using the split Bregman method for efficient optimization.
  • - This method allows for distributed problem-solving, where individual local controllers handle sub-problems independently, improving computational efficiency and system reliability during faults.
  • - A financial model is introduced to analyze the effect of certified emission reductions on annual revenue, showing that the split Bregman method outperforms other optimization methods in maximizing the wind farm's revenue.
View Article and Find Full Text PDF

When clustering gene expression, it is expected that correlation coefficients of genes in the same clusters are high, and that gene ontology (GO) enrichment analysis of most clusters will be significant. However, existing short-term gene expression clustering algorithms have limitations. To address this problem, we proposed a novel clustering process based on angular features for short-term gene expression.

View Article and Find Full Text PDF

Glaucoma is an optic neuropathy that may lead to visual field loss and blindness. Human trabecular meshwork (HTM) cell dysfunction increases intraocular pressure, which leads to glaucoma. microRNAs (miRs) are single‑stranded non‑coding RNAs that regulate cellular processes in HTM cells.

View Article and Find Full Text PDF

Explore if dexmedetomidine (DEX) improves neurodevelopment and cognitive impairment in infants with congenital heart disease. We retrospectively analyzed 256 pediatric patients aged less than 2 years with heart disease undergoing thoracic surgery. The intelligence quotient and neurodevelopment were tested.

View Article and Find Full Text PDF

Cleft palate (CP) is the second most common congenital birth defect. The etiology of CP is complicated, with involvement of various genetic and environmental factors. To investigate the gene regulatory mechanisms, we designed a powerful regulatory analytical approach to identify the conserved regulatory networks in humans and mice, from which we identified critical microRNAs (miRNAs), target genes and regulatory motifs (miRNA-TF-gene) related to CP.

View Article and Find Full Text PDF

Background: Tracheobronchial lacerations from trauma can be life-threatening and present significant challenges for safe anesthetic management. Early recognition of tracheal injuries and prompt airway control can be lifesaving.

Case Presentation: A 56-year-old man with no significant medical history presented with difficulty breathing after a blunt trauma to his chest to the emergency room and was diagnosed with dislocation of the first rib and tracheal laceration after a chest tomography (CT) study.

View Article and Find Full Text PDF

With the development of the materials science, biosensors tend to be thin, flexible, versatile, and are extensively employed in biotechnology, clinical diagnosis, biochips, etc. However, most existing biosensors are single-functionalized and destitute in contrivable microstructure, which result in some inherent limitations. In this work, a novel thin-film sensor that had dual response generated from one stimulus was designed based on the colloidal crystal templates and devisable circuit system.

View Article and Find Full Text PDF

Three molecular targeted tyrosine kinase inhibitors (TKI) were conjugated to classical platinum-based drugs with an aim to circumvent TKI resistance, predominately mediated by the emergence of secondary mutations on oncogenic kinases. The hybrids were found to maintain specificity towards the same oncogenic kinases as the original TKI. Importantly, they are remarkably less affected by TKI resistance, presumably due to their unique structure and the observed dual mechanism of anticancer activity (kinase inhibition and DNA damage).

View Article and Find Full Text PDF
Article Synopsis
  • - Chronic sleep deprivation in rats leads to significant negative effects, including weight loss, impaired learning and memory, and decreased movement abilities.
  • - The study utilized gene chips to analyze over 28,000 gene expressions in the prefrontal cortex of sleep-deprived rats, identifying 59 transcripts with differential expressions, linked to metabolism and circadian rhythms.
  • - SKF38393, a dopamine D1 receptor agonist, was found to reverse changes in two specific transcripts, including Homer1, which is crucial for synaptic function and pathways related to calcium signaling and neural function.
View Article and Find Full Text PDF