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Hydrolyzable tannins (HTs) have garnered significant attention due to their proven beneficial effects in the clinical treatment of various diseases. The cupule of Chinese cork oak ( Blume) has been used as raw material of traditional medicine for centuries for its high content of HTs. Previous studies have identified UGT84A13 as a key enzyme in the HT biosynthesis pathway in , but the transcriptional regulation network of remains obscure. Here, we performed a comprehensive genome-wide identification of the TCP transcription factors in , elucidating their molecular evolution and gene structure. Gene expression analysis showed that from the CIN subfamily and from the PCF subfamily were co-expressed with in cupule. Further functional characterization using dual-luciferase assays confirmed that TCP3, rather than TCP6, played a role in the transcriptional regulation of , thus promoting HT biosynthesis in the cupule of . Our work identified TCP family members in for the first time, and provided novel insights into the transcriptional regulatory network of and HT biosynthesis in , explaining the reason why the cupule enriches HTs that could be used for traditional medicine.
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http://dx.doi.org/10.3389/fpls.2024.1444081 | DOI Listing |
Plant Signal Behav
December 2025
School of Biotechnology, Kalinga Institute of Industrial Technology (KIIT) Deemed to be University, Bhubaneswar, India.
Nonexpressor of pathogenesis-related genes 1 (NPR1) is a master regulator of salicylic acid (SA)- facilitated plant hormone signaling and plays a crucial role in plant defense through the activation of systemic acquired resistance (SAR). Although like genes are associated with stress responses in a variety of plant species, no thorough genome-wide investigation of these genes has been undertaken in pearl millet (). This study discovered seven -like genes on four pearl millet chromosomes (Chr1, Chr2, Chr4, and Chr6), which exhibit close affinity to NPRs from other plants and have common gene structures, conserved motifs, and domains.
View Article and Find Full Text PDFJ Plant Physiol
September 2025
State Key Laboratory of Biocatalysis and Enzyme Engineering, School of Life Sciences, Hubei University, Wuhan, 430062, China. Electronic address:
RAV transcription factors play roles in a variety of diverse biological processes. However, their role in rice's response to drought and blast stress remains largely unexplored. In this study, we performed a genome-wide characterization and identification of rice RAV transcription factor family genes.
View Article and Find Full Text PDFPlant Sci
September 2025
College of Horticulture, Gansu Agricultural University, Lanzhou 730070, China.
Branched-chain amino acid aminotransferases (BCATs) catalyze both the final anabolic step and the initial catabolic step of branched-chain amino acids (BCAAs), which are pivotal for the formation of plant branched-chain volatiles (BCVs). However, the members of BCAT family in apple (Malus domestica Borkh.) remain poorly characterized.
View Article and Find Full Text PDFHGG Adv
September 2025
Department of Epidemiology, Bloomberg School of Public Health, Johns Hopkins University, Baltimore, MD 21205, USA; Department of Biostatistics, Bloomberg School of Public Health, Johns Hopkins University, Baltimore, MD 21205, USA. Electronic address:
Pleiotropy, the phenomenon where a genetic region confers risk to multiple traits, is widely observed, even among seemingly unrelated traits. Knowledge of pleiotropy can improve understanding of biological mechanisms of diseases/traits, and can potentially guide identification of molecular targets or help predict side-effects in drug development. However, statistical approaches for identifying pleiotropy genome-wide are limited, particularly for two correlated traits or case-control traits with unknown sample overlap or for disease traits from family studies.
View Article and Find Full Text PDFBMC Genomics
September 2025
Biodiversity and Crop Improvement Program, International Center for Agricultural Research in the Dry Areas, Rabat, 10100, Morocco.