Development of specific and rapid detection of human DNA by recombinase polymerase amplification assay for forensic analysis.

Forensic Sci Int Genet

Department of Forensic Genetics, West China School of Basic Medical Sciences and Forensic Medicine, Sichuan University, Chengdu, Sichuan, China. Electronic address:

Published: September 2023


Category Ranking

98%

Total Visits

921

Avg Visit Duration

2 minutes

Citations

20

Article Abstract

The determination of human-derived samples is very important in forensic investigations and case investigation in order to determine vital information on the suspect and the case. In this study, we established a recombinase polymerase amplification (RPA) assay for rapid identification of human-derived components. The sensitivity of the assay was 0.003125 ng, with excellent species specificity, and human-derived DNA could be detected in the presence of non-human-derived components at a ratio of 1:1000. Moreover, the RPA assay had a strong tolerance to inhibitors, in the presence of 800 ng/μL humic acid, 400 ng/μL tannic acid, and 8000 ng/μL collagen. In forensic investigation, common body fluids (blood, saliva, semen, vaginal secretions) are all applicable, and the presence of DNA can be detected from samples after simple alkaline lysis, which greatly shortens the detection time. Four simulation and case samples (aged bones, aged bloodstains, hair, touch DNA) were also successfully applied. The above research results show that the RPA assay constructed in this study can be fully applied to forensic medicine to provide high sensitivity and applicability detection methods.

Download full-text PDF

Source
http://dx.doi.org/10.1016/j.fsigen.2023.102903DOI Listing

Publication Analysis

Top Keywords

rpa assay
12
recombinase polymerase
8
polymerase amplification
8
dna detected
8
assay
5
development specific
4
specific rapid
4
rapid detection
4
detection human
4
dna
4

Similar Publications

The association of pre-neoadjuvant SUVmax and post-neoadjuvant change in SUVmax on FDG-PET with survival after oesophagectomy for cancer.

J Gastrointest Surg

September 2025

Department of Upper Gastrointestinal and Hepatobiliary Surgery, Royal Prince Alfred Hospital, Sydney, Australia; RPA Institute of Academic Surgery, Sydney, Australia; School of Medicine, University of Sydney, Sydney, Australia; Surgical Outcomes Research Centre (SOuRCe), Sydney, Australia.

Background: 18F-fluorodeoxyglucose positron emission tomography (FDG-PET) is currently widely used in staging and re-staging oesophageal cancer after neoadjuvant therapy. The maximal standardized uptake value (SUVmax) is a reproducible parameter that may predict survival. This study aimed to determine the prognostic significance of SUVmax and the change in SUVmax after neoadjuvant treatment (ΔSUVmax) on overall and disease-free survival.

View Article and Find Full Text PDF

A rapid and ultrasensitive CRISPR/Cas12a-based assay for the accurate identification of T-even type phages.

Biotechnol Lett

September 2025

Key Laboratory of Biomass Chemical Engineering of Ministry of Education, College of Chemical and Biological Engineering, Zhejiang University, Hangzhou, 310027, China.

Phage contamination poses a significant threat to industrial fermentation, leading to substantial economic losses. Virulent T-even type phages (T2/T4/T6) represent particularly concerning biological hazards in fermentation systems. This paper developed a novel CRISPR/Cas12a-based system integrated with recombinase polymerase amplification (RPA), enabling ultrasensitive identification of T-even type phages.

View Article and Find Full Text PDF

Development and application of a dual RT-qRPA assay for rapid differentiating of goose astrovirus genotypes 1 and 2.

Poult Sci

August 2025

Technology Center of Shijiazhuang Customs, Shijiazhuang 050051, China; College of Veterinary Medicine, Hebei Agricultural University, Baoding 071000, China. Electronic address:

Goose astrovirus (GAstV) is an important pathogen causing joint and visceral gout in goslings. Its high incidence and mortality had caused enormous economic losses to the goose farming industry. To achieve the simultaneous and rapid identification and detection of Goose astrovirus genotype 1 (GAstV-1) and genotype 2 (GAstV-2), the present study aimed to design and synthesize specific recombinase polymerase amplification (RPA) primers and exo probes targeting the ORF1b gene of GAstV.

View Article and Find Full Text PDF

Frequency and factors associated with the preference for self-testing for human papillomavirus detection.

Rev Peru Med Exp Salud Publica

August 2025

Universidad Nacional Mayor de San Marcos, Facultad de Medicina, Lima, Perú.

Background: Motivation for the study. Cervical screening is key to early detection of cancer, but its acceptability limits its implementation. It is essential to understand preferences for self-sampling to facilitate its implementation.

View Article and Find Full Text PDF

Background: The genus primarily consists of arthropod-borne viruses capable of infecting vertebrate hosts and causing serious human diseases such as dengue fever, Zika fever, Japanese encephalitis, West Nile fever, and yellow fever. This study describes the development of a simple and field-deployable detection system for multiple pathogenic orthoflavivirus species using the recombinase polymerase amplification (RPA) technique.

Methods: Several previously published broad-specific primers targeting the genus were evaluated.

View Article and Find Full Text PDF