Acute myeloid leukemia (AML) is a highly heterogeneous hematological malignancy that increasingly affects the elderly population, with its post-transcriptional landscape remaining largely elusive. Establishing a stable proteomics-based classification system and systematically screening age-related proteins and regulatory networks are crucial for understanding the pathogenesis and outcomes of AML. In this study, we leveraged a multi-omics cohort of 374 newly diagnosed AML patients, integrating proteome, phosphoproteome, genome, transcriptome, and drug screening data.
View Article and Find Full Text PDFGenomics Proteomics Bioinformatics
May 2025
Precise mapping of leukemic cells onto the known hematopoietic hierarchy is important for understanding the cell-of-origin and mechanisms underlying disease initiation and development. However, this task remains challenging because of the high interpatient and intrapatient heterogeneity of leukemia cell clones as well as the differences that exist between leukemic and normal hematopoietic cells. Using single-cell RNA sequencing (scRNA-seq) data with a curated clustering approach, we constructed a comprehensive reference hierarchy of normal hematopoiesis.
View Article and Find Full Text PDFGenomics Proteomics Bioinformatics
May 2025
Single-cell RNA sequencing (scRNA-seq) and spatial transcriptomics (ST) techniques hold great value in evaluating the heterogeneity and spatial characteristics of hematopoietic cells within tissues. These two techniques are highly complementary, with scRNA-seq offering single-cell resolution and ST retaining spatial information. However, there is an urgent demand for well-organized and user-friendly toolkits capable of handling single-cell and spatial information.
View Article and Find Full Text PDFIntroduction: Acute myeloid leukemia (AML) is an aggressive blood cancer with high heterogeneity and poor prognosis. Although the metabolic reprogramming of nicotinamide adenine dinucleotide (NAD) has been reported to play a pivotal role in the pathogenesis of acute myeloid leukemia (AML), the prognostic value of NAD metabolism and its correlation with the immune microenvironment in AML remains unclear.
Methods: We utilized our large-scale RNA-seq data on 655 patients with AML and the NAD metabolism-related genes to establish a prognostic NAD metabolism score based on the sparse regression analysis.
Proc Natl Acad Sci U S A
March 2024
Polymers (Basel)
June 2023
A Fe-N conjugated organic polymer (SMP-Fr-Py) was prepared from ferrocene and pyrrole using a Scholl coupling reaction, which significantly improved the performance of Cr(VI) removal compared to the polymer (HCP-Fr-Py) prepared by adding the cross-linker formaldehyde dimethyl acetal (FDA). The results showed that at a pH of 2 and at 25 °C, the removal of Cr(VI) reached 90% for SMP-Fr-Py and only 58% for HCP-Fr-Py after 20 min of reaction. Subsequently, 99% and 78% were achieved after 120 min of reaction, respectively.
View Article and Find Full Text PDFClin Transl Med
June 2023
Background: Genetic mutations of IKZF1 have been frequently delineated in B-lineage acute leukaemia (B-ALL) but rarely elucidated in acute myeloid leukaemia (AML). IKZF1 mutations confer a poor prognosis in AML, and hotspot mutations of IKZF1, N159Y and N159S tend to occur in B-ALL and AML respectively. However, the pathogenesis of IKZF1 N159S in AML and IKZF1 lineage susceptibility are largely unknown.
View Article and Find Full Text PDFProc Natl Acad Sci U S A
December 2022
The current classification of acute myeloid leukemia (AML) relies largely on genomic alterations. Robust identification of clinically and biologically relevant molecular subtypes from nongenomic high-throughput sequencing data remains challenging. We established the largest multicenter AML cohort (n = 655) in China, with all patients subjected to RNA sequencing (RNA-Seq) and 619 (94.
View Article and Find Full Text PDFComplex biomedical data generated during clinical, omics and mechanism-based experiments have increasingly been exploited through cloud- and visualization-based data mining techniques. However, the scientific community still lacks an easy-to-use web service for the comprehensive visualization of biomedical data, particularly high-quality and publication-ready graphics that allow easy scaling and updatability according to user demands. Therefore, we propose a community-driven modern web service, Hiplot (https://hiplot.
View Article and Find Full Text PDFMicromachines (Basel)
May 2022
Periodic excitation is a relatively simple and common active control mode. Owing to the advantages of direct access to environmental energy and controllability under periodic illumination, it enjoys broad prospects for application in soft robotics and opto-mechanical energy conversion systems. More new oscillating systems need to be excavated to meet the various application requirements.
View Article and Find Full Text PDFEBioMedicine
December 2020
Hematol Oncol
October 2019
Environ Sci Pollut Res Int
January 2017
Petroleum hydrocarbons released to the environment caused by leakage or illegal dumping pose a threat to human health and the natural environment. In this study, the potential of a pulsed corona discharge plasma system for treating petroleum-polluted soils was evaluated. This system removed 76.
View Article and Find Full Text PDFJ Nanosci Nanotechnol
June 2016
A facile and economical one-pot strategy has been developed for the synthesis of water-solute CdTe and CdTe/ZnS core/shell quantum dots (QDs) using tellurium dioxide (TeO2) as a tellurium precursor and thioglycolic acid (TGA) as stabilizer without any pre-treatment and inert atmosphere protection. As-synthesized QDs were characterized by transmission electron microscopy (TEM), high-resolution transmission electron microscopy (HRTEM), electron diffraction spectroscopy (EDS), X-ray powder diffraction (XRD), UV-vis and photoluminescence (PL). The spherical particles were uniformly distributed with the average diameters of 3.
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