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Zygotic genome activation (ZGA) confers to the mouse two-cell (2C) embryo a unique transcriptional profile characterized by transient up-regulation of many totipotency-related genes and retrotransposons. Intriguingly, those genes are duplicated and clustered in the genome during evolution, including cluster, and family members in mice. However, the contribution and biological significance of the totipotency-related gene duplication events in early embryo development remain poorly understood. Here, we focus on cluster, the master regulator of ZGA that is necessary and sufficient for the induction of 2C-like cells and activation of totipotency-related genes in mouse embryonic stem cells (mESCs). By reducing gene copies from 31 to 0 or 1 through CRISPR-Cas9 technology, we generate -KO and (n = 1) mESC lines, respectively. We uncover that the totipotency-related gene transcriptional profile is awakened to a much lesser extent in (n = 1) mESCs compared to wild type mESCs following global DNA demethylation reprogramming or induction of DNA damage, mimicking the intrinsic events in preimplantation development. Together, cluster duplication is critically required for full activation of ZGA transcripts.
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http://dx.doi.org/10.1073/pnas.2421594122 | DOI Listing |
Plant Physiol Biochem
August 2025
School of Life Science and Engineering, Southwest Jiaotong University, Chengdu, 610031, China. Electronic address:
The PR10 (Pathogenesis-Related Protein 10) family plays a crucial role in plant defense and growth regulation, with unique hydrophobic cavities that bind various ligands, including phytohormones and alkaloids. Among them, Norcoclaurine Synthases (NCS) are key enzymes in benzylisoquinoline alkaloid (BIAs) biosynthesis, catalyzing the Pictet-Spengler reaction to form the precursor (S)-norcoclaurine. However, the evolutionary origins and functions of the PR10 family in BIA biosynthesis remain unclear.
View Article and Find Full Text PDFChem Biol Interact
September 2025
School of Public Health, Ningxia Medical University, Yinchuan City, Ningxia Hui Autonomous Region, China; Key Laboratory of Environmental Factors and Chronic Disease Control, No.1160, The Street of Shengli, Xingqing District, Yinchuan, Ningxia Hui Autonomous Region, China. Electronic address: hmin81
Paraquat (PQ) is characterized by neurotoxicity. In daily life, PQ exposure mainly occurs through chronic and trace pathways, which induce progressive neuronal damage or neuronal synaptic loss. Previously, mitochondrial dysfunction was a critical underlying mechanism.
View Article and Find Full Text PDFJMIR Infodemiology
September 2025
Center for Enhancing Quality of Life in Chronic Illness, School of Nursing, Indiana University Indianapolis, 600 Barnhill Drive, Indianapolis, IN, 46202, United States, 1 574-703-4472.
Background: Cyber victimization exposes individuals to numerous risks. Developmental and psychological factors may leave some users unaware of the potential dangers, increasing their susceptibility to psychological distress. Despite this vulnerability, methods for identifying those at risk of cyber victimization within health care settings are limited, as is research that explores their experiences of cyber victimization.
View Article and Find Full Text PDFFront Med (Lausanne)
August 2025
Clinical Medical College & Affiliated Hospital & College of Basic Medicine, Chengdu University, Chengdu, China.
Objective: Despite growing interest in the application of machine learning (ML) in proteomics, a comprehensive and systematic mapping of this research domain has been lacking. This study addresses this gap by conducting the first large-scale bibliometric analysis focused exclusively on ML-driven proteomics, aiming to elucidate its knowledge structure, development trajectory, and emerging research trends.
Methods: A total of 5,156 publications from the Web of Science Core Collection (1997-2024) were retrieved and analyzed.
BMC Plant Biol
September 2025
Kazusa DNA Research Institute, 2-6-7 Kazusa-Kamatari, Kisarazu, Chiba, 292-0818, Japan.
Background: Pear scab, caused by Venturia nashicola, is one of the most serious diseases affecting Asian pear (Pyrus spp.) production. While single-gene resistance has been used in breeding, it is often overcome by evolving pathogens.
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