98%
921
2 minutes
20
Insect olfactory receptors (iORs) with atypical 7-transmembrane domains, unlike Chordata olfactory receptors, are not in the GPCR protein family. iORs selectively bind to volatile ligands in the environment and affect essential insect behaviors. In this study, we constructed a new platform (iORbase, https://www.iorbase.com) for the structural and functional analysis of iORs based on a combined algorithm for gene annotation and protein structure prediction. Moreover, it provides the option to calculate the binding affinities and binding residues between iORs and pheromone molecules by virtual screening of docking. Furthermore, iORbase supports the automatic structural and functional prediction of user-submitted iORs or pheromones. iORbase contains the well-analyzed results of approximately 6 000 iORs and their 3D protein structures identified from 59 insect species and 2 077 insect pheromones from the literature, as well as approximately 12 million pairs of simulated interactions between functional iORs and pheromones. We also built 4 online modules, iORPDB, iInteraction, iModelTM, and iOdorTool to easily retrieve and visualize the 3D structures and interactions. iORbase can help greatly improve the experimental efficiency and success rate, identify new insecticide targets, or develop electronic nose technology. This study will shed light on the olfactory recognition mechanism and evolutionary characteristics from the perspectives of omics and macroevolution.
Download full-text PDF |
Source |
---|---|
http://dx.doi.org/10.1111/1744-7917.13162 | DOI Listing |
J Econ Entomol
September 2025
State Key Laboratory for Biology of Plant Diseases and Insect Pests, Institute of Plant Protection, Chinese Academy of Agricultural Sciences, Beijing 100193, China.
The ability of parasitoid wasps to precisely locate hosts in complex environments is a key factor in suppressing pest populations. Chemical communication plays an essential role in mediating insect behaviors such as locating food sources, hosts, and mates. Odorant receptors (ORs) are the key connection between external odors and olfactory nerves.
View Article and Find Full Text PDFCurr Biol
August 2025
National Key Laboratory of Green Pesticide, Guangzhou 510642, China; Key Laboratory of Crop Integrated Pest Management in South China, Ministry of Agriculture, South China Agricultural University, Guangzhou 510642, China. Electronic address:
Plant viruses are known to indirectly manipulate insect vector behavior by altering host-plant phenotypes, yet the mechanisms by which they directly regulate vector behavior to enhance transmission remain poorly understood. Here, we reveal how the southern rice black-streaked dwarf virus (SRBSDV) reprograms the host preference of its planthopper vector, Sogatella furcifera, from infected to healthy rice plants by disrupting immune-olfactory crosstalk. We demonstrate that the SRBSDV-encoded P8 protein competitively binds to the S.
View Article and Find Full Text PDFACS Appl Mater Interfaces
September 2025
Graduate School of Frontier Sciences, The University of Tokyo, 5-1-5 Kashiwanoha, Kashiwa, Chiba 277-8568, Japan.
Chemical sensor arrays mimic the mammalian olfactory system to achieve artificial olfaction, and receptor materials resembling olfactory receptors are being actively developed. To realize practical artificial olfaction, it is essential to provide guidelines for developing effective receptor materials based on the structure-activity relationship. In this study, we demonstrated the visualization of the relationship between sensing signal features and odorant molecular features using an explainable AI (XAI) technique.
View Article and Find Full Text PDFPestic Biochem Physiol
November 2025
Key Laboratory of Plant Protection Resources and Pest Management of Ministry of Education, College of Plant Protection, Northwest A&F University, Yangling 712100, Shaanxi, China; Key Laboratory of Integrated Pest Management on Crops in Northwestern Loess Plateau of Ministry of Agriculture and Rural
The olfactory system of insects plays a vital role in their survival by enabling them to detect chemical cues and adapt to changing environments. The rape stem weevil, Ceutorhynchus asper, is a significant pest posing a challenge for rapeseed production due to its destructive feeding habit and increasing resistance to insecticides. So far, there's still limited knowledge about structure and function of odorant binding proteins (OBPs) in beetles like C.
View Article and Find Full Text PDFPestic Biochem Physiol
November 2025
National Key Laboratory for Development and Utilization of Forest Food Resources, Zhejiang A&F University, Hangzhou 311300, China. Electronic address:
The pine-forest guardian Dastarcus helophoroides mainly rely on olfaction to locate its host accurately and interact socially. Odorant binding proteins of D. helophoroides play an important role in olfactory recognition and transporting odors to olfactory receptors to trigger signal transduction.
View Article and Find Full Text PDF