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Exploring the characteristic functions of polynucleotide kinase (PNK) could substantially promote the elucidation of PNK-related mechanistic pathways. Yet, the sensitive and reliable detection of intracellular PNK still presents a challenging goal. Herein, we propose a simple autocatalytic hybridization circuit (AHC) for intracellular imaging of PNK with high reliability. The AHC amplifier consists of two mutually activated hybridization chain reaction (HCR) modules for magnified signal transduction. The PNK is transduced into initiator by phosphorylation and cleavage of mediator . Initiator activates the initial HCR-1 module, leading to the formation of long dsDNA nanowires that carry numerous initiator . Then, -initiated feedback HCR-2 module generates branched products that contain plentiful initiator , thus realizing an autocatalytic HCR amplification reaction. Simultaneously, the HCR-2 module is also assembled as a versatile signal transduction unit for generating the amplified readout. Based on the mutually sustained accumulation of two initiators for the reciprocal activation of two reaction modules, continuous signal amplification and assembly of high-molecular-weight copolymers endow the AHC system with high sensitivity and robustness for the PNK assay. Moreover, the PNK-sensing AHC system achieves reliable imaging of intracellular PNK, thus showing great potential to decipher the correlation between PNK and related diseases.
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http://dx.doi.org/10.1021/acs.analchem.2c03169 | DOI Listing |
Materials (Basel)
April 2025
College of Physics and Information Engineering, Fuzhou University, Fuzhou 350100, China.
Micro Light Emitting Diode (Micro-LED) technology, characterized by exceptional brightness, low power consumption, fast response, and long lifespan, holds significant potential for next-generation displays, yet its commercialization hinges on resolving challenges in high-density interconnect fabrication, particularly micrometer-scale bump formation. Traditional fabrication approaches such as evaporation enable precise bump control but face scalability and cost limitations, while electroplating offers lower costs and higher throughput but suffers from substrate conductivity requirements and uneven current density distributions that compromise bump-height uniformity. Emerging alternatives include electroless plating, which achieves uniform metal deposition on non-conductive substrates through autocatalytic reactions albeit with slower deposition rates; ball mounting and dip soldering, which streamline processes via automated solder jetting or alloy immersion but struggle with bump miniaturization and low yield; and photosensitive conductive polymers that simplify fabrication via photolithography-patterned composites but lack validated long-term stability.
View Article and Find Full Text PDFPrecis Chem
April 2025
Department of Chemistry, Faculty of Science, The Chinese University of Hong Kong, Sha Tin, New Territories, Hong Kong 999077, China.
Nonenzymatic nucleic acid amplification reactions, especially nonenzymatic DNA amplification reactions (NDARs), are thermodynamically driven processes that operate without enzymes, relying on toehold-mediated strand displacement (TMSD) and branch migration. With their sensitive and efficient signal amplification capabilities, NDARs have become essential tools for biomarker detection and intracellular imaging. They encompass four primary amplification methods: catalytic hairpin assembly (CHA), hybridization chain reaction (HCR), DNAzyme-based amplification, and entropy-driven circuits (EDC).
View Article and Find Full Text PDFJ Hazard Mater
July 2025
College of Environmental Science and Engineering, Shanghai Institute of Pollution Control and Ecological Security, State Key Laboratory of Pollution Control and Resource Reuse, Tongji University, Shanghai 200092, China.
Antibiotic resistance genes (ARGs)-contamination in water systems is a global concern, accelerating antimicrobial resistance and threatening public health, which demands an effective, low-cost and stable method for their on-site detection. Herein, we developed an innovative approach by combining the hybridization chain reaction (HCR) with deoxyribozymes to design an isothermal enzyme-free cascade initiator regenerating (IR) HCR-based amplification system. Minute quantities of targets can trigger exponentially amplified fluorescence signals through the self-catalytic feedback loop of the HCR mechanism.
View Article and Find Full Text PDFBio Protoc
December 2024
Xiangya School of Pharmaceutical Sciences, Central South University, Changsha, China.
MicroRNAs (miRNAs) are small, non-coding RNAs that play pivotal roles in gene regulation; they are increasingly recognized as vital biomarkers for various diseases, notably cancer. Conventional methods for miRNA detection, such as quantitative PCR and microarray analysis, often entail intricate sample preparation and lack the requisite sensitivity to detect low-abundance miRNAs like miRNA-21. This protocol presents an innovative approach that combines branched hybridization chain reaction (bHCR) with DNAzyme technology for the precise detection of miRNA-21.
View Article and Find Full Text PDFInt J Biol Macromol
February 2025
College of Chemical Engineering, Xiangtan University, Xiangtan 411105, China.
Ochratoxin A (OTA) is a compound of concern due to its potential health effects on humans. Detecting OTA in food is crucial for safeguarding public health. In this study, we fabricated a multi-DNAzyme cascade reaction-mediated colorimetric aptasensors for OTA detection, integrating autocatalytic Mg-dependent DNAzyme cleavage (MNAzyme) and an entropy-driven circuit.
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