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Aims: How recoding of fnr, an anaerobic regulatory gene, affects pathogenicity related parameters of Salmonella Typhimurium (STM).
Methods And Results: The fnr gene was recoded by substituting all of it's codons with synonymous rare codons of STM. Recoding fnr gene severely reduced the ability of the recoded mutant to compete with wild strain under nutrient depletion condition. Mutants were also less motile than the wild strain and their biofilm forming ability was significantly decreased as compared to wild strain. The recoded strain showed significant reduced survival within murine macrophages (RAW264.7) and monocyte derived macrophage of poultry origin. The colonisation ability of recoded mutant in liver and spleen of mice on day 5 of post infection was significantly reduced. The recoded strain exhibited significant reduction in faecal shedding on day 1 and 5 after infection.
Conclusions: Our study showed that recoding the anaerobic regulator fnr of STM significantly compromised its growth, decreased motility, biofilm forming ability and survival within macrophages. Further, the recoded fnr strain showed reduced colonisation ability and faecal shedding in mice. Thus, these findings highlight that recoding the global anaerobic regulator fnr of Salmonella Typhimurium attenuates its pathogenicity.
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http://dx.doi.org/10.1016/j.micpath.2022.105591 | DOI Listing |
J Environ Manage
September 2025
National and Local Joint Engineering Laboratory of Municipal Sewage Resource Utilization Technology, Jiangsu Collaborative Innovation Center of Technology and Material of Water Treatment, School of Environmental Science and Engineering, Suzhou University of Science and Technology, Suzhou, 215009, Ch
The anaerobic ammonia oxidation (anammox) process has attracted considerable interest for its advantages in low energy requirements, reduced sludge output, and eliminating the need for external carbon sources. However, its application is constrained by the long generation time, slow growth, and challenges in enriching anammox bacteria. Studies indicate that carbon material addition significantly accelerates anammox bacteria proliferation, enhances nitrogen removal efficiency, and improves anammox microbial activity.
View Article and Find Full Text PDFMethodsX
December 2025
Animal Nutrition Division, ICAR-National Dairy Research Institute, Karnal-132001, India.
In vitro simulation of rumen fermentation is critical for improving feed efficiency, assessing dietary interventions, and supporting methane mitigation strategies in ruminant production systems. However, existing fermentation platforms are often expensive, technically complex, or poorly suited for long-term microbial viability under near-rumen conditions-especially in resource-limited settings. This study presents the development and validation of a modular, low-cost engineered to replicate key physiological parameters of the rumen, including temperature control (39-40 °C), continuous buffering via artificial saliva infusion, anaerobic regulation, and simulated motility through mixing pumps.
View Article and Find Full Text PDFPhysiol Plant
September 2025
Group of Antioxidants, Free Radicals and Nitric Oxide in Biotechnology, Food and Agriculture, Department of Stress, Development and Signaling in Plants, Estación Experimental del Zaidín, Spanish National Research Council (CSIC), Granada, Spain.
Waterlogging, increasingly intensified by climate change, limits oxygen availability in the root zone, disrupting carbon and sugar metabolism, leading to energy deficits and oxidative stress that ultimately impair plant growth and productivity. Melatonin, a versatile signaling molecule, mitigates waterlogging-induced stress by enhancing anaerobic respiration and fermentation under oxygen-deprived conditions, upregulating stress-responsive genes, and restoring energy balance through optimized sugar metabolism. It also reduces oxidative damage by strengthening the antioxidant defense system and further improves stress tolerance by modulating phytohormone signaling and influencing rhizosphere microbiome dynamics.
View Article and Find Full Text PDFJ Biol Chem
September 2025
Biophysics and Structural Genomics Division, Saha Institute of Nuclear Physics, 1/AF Bidhannagar, Kolkata 700064, India; Homi Bhabha National Institute, Anushakti Nagar, Mumbai 400094, India. Electronic address:
Breast cancer, a leading cause of mortality, exhibits significant heterogeneity across molecular subtypes, with tumor hypoxia contributing to poor therapeutic outcomes. The present study investigates the role of ZMYND8, a hypoxia-responsive epigenetic factor, in regulating carbohydrate metabolism in concert with HIF1α in breast cancer. In adherent cells as well as in 3D MCTS, ZMYND8 expression is elevated under hypoxic conditions.
View Article and Find Full Text PDFBiology (Basel)
August 2025
State Key Laboratory of Marine Geology, Tongji University, Shanghai 200092, China.
Branched glycerol dialkyl glycerol tetraethers (brGDGTs) are promising molecular biomarkers widely applied in paleoenvironmental reconstructions, including temperature and pH. However, knowledge of the microorganisms responsible for brGDGT production in marine environments remains limited, which constrains the further development and application of brGDGT-based proxies for reconstructing past marine conditions. In this study, both 'living' intact polar lipid-derived brGDGTs (IPL-brGDGTs) and 'fossil' core brGDGTs (CL-brGDGTs), together with bacterial community compositions, were analysed in multiple sediment cores collected along a nearshore-to-offshore transect in the East China Sea (ECS).
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