Quantitative Evaluation of Endogenous Reference Genes for RT-qPCR and ddPCR Gene Expression Under Polyextreme Conditions Using Anaerobic Halophilic Alkalithermophile .

Accurate gene expression quantification using reverse transcription quantitative PCR (RT-qPCR) requires stable reference genes (RGs) for reliable normalization. However, few studies have systematically identified RGs suitable for simultaneous high salt, alkaline, and high-temperature conditions. This study addresses this gap by evaluating the stability of eight candidate RGs in the anaerobic halophilic alkalithermophile JW/NM-WN-LF under combined salt, alkali, and thermal stresses.

Multiomics Reveals the Mechanism of Adaptation to Combined Hypersaline, Alkaline, and Elevated Temperature Environments.

The halophilic alkalithermophile grows optimally at the combined extremes of 3.3-3.9 M Na, pH 9.

Cross and unique stress adaptation strategies of the polyextremophile Natranaerobius thermophilus to individual high salt, alkaline pH, and elevated temperature.

N. thermophilus is the first true anaerobic halophilic alkalithermophile. It employs a unique dual mechanism for hypersaline adaptation, utilizing both "compatible solutes" and "salt in" strategies.

1,4-Dioxane Induces Epithelial-Mesenchymal Transition and Carcinogenesis in an Nrf2-Dependent Manner.

The carcinogenic potential of the environmental pollutant 1,4-dioxane (1,4-D) in humans is not yet fully understood or recognised. In this study, we provide evidence that 1,4-D acts as a carcinogen in human epithelial cells. Using the human bronchial epithelial cell line BEAS-2B, with or without CRISPR-Cas9-mediated Nrf2 knockout, we demonstrate that continuous exposure to environmentally relevant concentrations of 1.

Biologically active filtration (BAF) for metabolic 1,4-dioxane removal from contaminated groundwater.

1,4-Dioxane is a persistent contaminant that is not effectively removed by conventional water treatment processes. In this study, bench-scale granular activated carbon (GAC)-based biologically active filtration (BAF) systems were developed to metabolically degrade 1,4-dioxane at environmentally relevant levels (<1000 μg L). BAF was established using predeveloped biologically activated carbon particles by mixing a 1,4-dioxane-degrading microbial community with granular activated carbon.

Odorant production surges induced by exogenous oxidative stress: An overlooked risk in PAA-based moderate preoxidation for algal-laden water.

Moderate preoxidation is feasible for odor-producing algae treatments, usually requiring trade-offs in algal removal and integrity maintenance. However, dosing oxidants may cause internal oxidative homeostasis imbalances and secondary odorous metabolite responses, adding new trade-offs for moderate treatments. Peracetic acid (PAA)/Fe processes are promising strategies in moderate treatments and thus were applied to examine how to achieve the following three trade-offs: good algal removal, no odorant increases and no releases.

Greenhouse gas emission and denitrification kinetics of woodchip bioreactors treating onsite wastewater.

The accurate evaluation of denitrification rate and greenhouse gas (GHG) emission in field-scale woodchip bioreactors for onsite wastewater treatment are problematic due to inevitably varied environmental conditions and underestimated GHG production with limited analysis of dissolved gas in field samples. To address these problems, batch incubation experiments were conducted with controlled conditions to precisely evaluate the denitrification kinetics and NO and CH emission of both gaseous and dissolved phases in fresh (6 months) and aged (5 years) woodchip bioreactors treating onsite wastewater at high (1-3 mg L) and no (0 mg L) dissolved oxygen (DO) levels. NO removal rate decreased from 37.

Phosphorus attenuation and mobilization in sand filters treating onsite wastewater.

The effectiveness of phosphorus (P) removal by sand filters is limited during septic tank effluent (STE) treatment. The elevated effluent P concentrations pose threats to drinking water quality and contribute to eutrophication. The concern of P leaching from sand filters is further exacerbated by the increased frequency of flooding and natural precipitation due to climate change.

Response surface methodology for process optimization in livestock wastewater treatment: A review.

With increasing demand for meat and dairy products, the volume of wastewater generated from the livestock industry has become a significant environmental concern. The treatment of livestock wastewater (LWW) is a challenging process that involves removing nutrients, organic matter, pathogens, and other pollutants from livestock manure and urine. In response to this challenge, researchers have developed and investigated different biological, physical, and chemical treatment technologies that perform better upon optimization.

The polyextremophile adopts a dual adaptive strategy to long-term salinity stress, simultaneously accumulating compatible solutes and K.

The bacterium is an extremely halophilic alkalithermophile that can thrive under conditions of high salinity (3.3-3.9 M Na), alkaline pH (9.

Exploring the ignored role of escaped algae in a pilot-scale DWDS: Disinfectant consumption, DBP yield and risk formation.

Insufficient treatments during bloom-forming seasons allow algae to enter the subsequent drinking water distribution system (DWDS). Yet, scarce information is available regarding the role escaped algae to play in the DWDS, and how they interact with the system. Thus, three scenarios were conducted: a pilot DWDS with algae (a), pipe water (b), and pipe water with algae (c).

1,4-Dioxane removal in nitrifying sand filters treating domestic wastewater: Influence of water matrix and microbial inhibitors.

1,4-Dioxane is a recalcitrant pollutant in water and is ineffectively removed during conventional water and wastewater treatment processes. In this study, we demonstrate the application of nitrifying sand filters to remove 1,4-dioxane from domestic wastewater without the need for bioaugmentation or biostimulation. The sand columns were able to remove 61 ± 10% of 1,4-dioxane on average (initial concentration: 50 μg/L) from wastewater, outperforming conventional wastewater treatment approaches.

Nitrogen removal mechanisms in biochar-amended sand filters treating onsite wastewater.

The performance of biochar-amended sand filters treating septic tank effluent (STE) was investigated in bench-scale columns. Softwood biochar showed higher NH -N adsorption capacity (1.3 mg N g ), and its water holding capacity (0.

Characterization of 1,4-dioxane degrading microbial community enriched from uncontaminated soil.

1,4-Dioxane is a contaminant of emerging concern that has been commonly detected in groundwater. In this study, a stable and robust 1,4-dioxane degrading enrichment culture was obtained from uncontaminated soil. The enrichment was capable to metabolically degrade 1,4-dioxane at both high (100 mg L) and environmentally relevant concentrations (300 μg L), with a maximum specific 1,4-dioxane degradation rate (q) of 0.

Efficient nitrogen removal from onsite wastewater by a novel continuous flow biofilter.

Soil-based passive biofiltration system is an economically feasible technology for nitrogen removal from onsite wastewater. However, the conventional design requires a large system footprint with limited treatment capacity. In this study, a novel continuous flow biofilter (CFB) with adjustable recirculation and continuous flow pattern was developed for onsite wastewater treatment with a small footprint.

Biochar application in biofiltration systems to remove nutrients, pathogens, and pharmaceutical and personal care products from wastewater.

Although conventional on-site wastewater treatment systems (OWTSs) provide only primary treatment of domestic wastewater, removal of a limited level of nutrients (N, P), pathogens, and pharmaceuticals and personal care products (PPCPs) could be achieved by such a treatment process. Biochar has the capacity to remove various contaminants and has been widely used as an ideal soil amendment in agriculture due to its persistence, superior nutrient-retention properties, low cost, and ready availability. However, few applications on the use of biochar in onsite wastewater treatment have been explored.

Removal of 1,4-dioxane during on-site wastewater treatment using nitrogen removing biofilters.

The presence and release of 1,4-dioxane to groundwater from onsite-wastewater treatment systems (OWTS), which represent 25% of the total wastewater treatment in the U.S., has not been studied to date.

Potential release of legacy nitrogen from soil surrounding onsite wastewater leaching pools.

This study examined whether the accumulation of nitrogen (legacy nitrogen) within and surrounding leaching pools for onsite wastewater treatment may act as a source of nitrogen contamination to groundwater upon changes to the quantity and/or composition of the influent to the pool. In this study, one concrete leaching pool with neutral pH (A, pH 6.9) and one leaching pool after acid washing (B, pH 3.

Structural dynamics and transcriptomic analysis of Dehalococcoides mccartyi within a TCE-Dechlorinating community in a completely mixed flow reactor.

A trichloroethene (TCE)-dechlorinating community (CANAS) maintained in a completely mixed flow reactor was established from a semi-batch enrichment culture (ANAS) and was monitored for 400 days at a low solids retention time (SRT) under electron acceptor limitation. Around 85% of TCE supplied to CANAS (0.13 mmol d) was converted to ethene at a rate of 0.

An ignored and potential source of taste and odor (T&O) issues-biofilms in drinking water distribution system (DWDS).

It is important for water utilities to provide esthetically acceptable drinking water to the public, because our consumers always initially judge the quality of the tap water by its color, taste, and odor (T&O). Microorganisms in drinking water contribute largely to T&O production and drinking water distribution systems (DWDS) are known to harbor biofilms and microorganisms in bulk water, even in the presence of a disinfectant. These microbes include T&O-causing bacteria, fungi, and algae, which may lead to unwanted effects on the organoleptic quality of distributed water.

Effects of Sulfate Reduction on Trichloroethene Dechlorination by Dehalococcoides-Containing Microbial Communities.

In order to elucidate interactions between sulfate reduction and dechlorination, we systematically evaluated the effects of different concentrations of sulfate and sulfide on reductive dechlorination by isolates, constructed consortia, and enrichments containing sp. Sulfate (up to 5 mM) did not inhibit the growth or metabolism of pure cultures of the dechlorinator 195, the sulfate reducer Hildenborough, or the syntroph In contrast, sulfide at 5 mM exhibited inhibitory effects on growth of the sulfate reducer and the syntroph, as well as on both dechlorination and growth rates of Transcriptomic analysis of 195 revealed that genes encoding ATP synthase, biosynthesis, and Hym hydrogenase were downregulated during sulfide inhibition, whereas genes encoding metal-containing enzymes involved in energy metabolism were upregulated even though the activity of those enzymes (hydrogenases) was inhibited. When the electron acceptor (trichloroethene) was limiting and an electron donor (lactate) was provided in excess to cocultures and enrichments, high sulfate concentrations (5 mM) inhibited reductive dechlorination due to the toxicity of generated sulfide.

Acetylene Fuels TCE Reductive Dechlorination by Defined Dehalococcoides/Pelobacter Consortia.

Acetylene (CH) can be generated in contaminated groundwater sites as a consequence of chemical degradation of trichloroethene (TCE) by in situ minerals, and CH is known to inhibit bacterial dechlorination. In this study, we show that while high CH (1.3 mM) concentrations reversibly inhibit reductive dechlorination of TCE by Dehalococcoides mccartyi isolates as well as enrichment cultures containing D.

Membrane Complexes of Involved in Syntrophic Butyrate Degradation and Hydrogen Formation.

Syntrophic butyrate metabolism involves the thermodynamically unfavorable production of hydrogen and/or formate from the high potential electron donor, butyryl-CoA. Such redox reactions can occur only with energy input by a process called reverse electron transfer. Previous studies have demonstrated that hydrogen production from butyrate requires the presence of a proton gradient, but the biochemical machinery involved has not been clearly elucidated.

[Effects of intensive management on abundance and composition of soil N2-fixing bacteria in Phyllostachys heterocycla stands].

Denaturing gradient-gel electrophoresis and real-time quantitative PCR (qPCR) were employed to determine the effects of intensive management on soil N2-fixing bacteria in a moso bamboo (Phyllostachys heterocycla) plantation. Soil samples were collected from the moso bamboo stands receiving 0 (CK), 10, 15, 20, and 25 years of intensive management. It was found that intensive management caused a strong decrease in soil pH but a general increase in soil available nutrients.

Efficient metabolic exchange and electron transfer within a syntrophic trichloroethene-degrading coculture of Dehalococcoides mccartyi 195 and Syntrophomonas wolfei.

Dehalococcoides mccartyi 195 (strain 195) and Syntrophomonas wolfei were grown in a sustainable syntrophic coculture using butyrate as an electron donor and carbon source and trichloroethene (TCE) as an electron acceptor. The maximum dechlorination rate (9.9 ± 0.