Publications by authors named "Tianyang Li"

Objective: Exosomes as important carriers of intercellular communication have frequently appeared in recent studies related to osteoarthritis (OA), while the specific mechanism of exosome action in osteoarthritis remains unclear. The aim of this study was to identify potential exosome-related biomarkers in osteoarthritis, to explore the role and mechanism of exosome-related genes in articular cartilage.

Methods: The data on exosome related genes and normal and OA cartilage genes were obtained through online databases.

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Multiobjective reinforcement learning (MORL) aims to seek a complete Pareto front (PF) with different compromise policies in multiobjective Markov decision processes (MOMDPs). However, most MORL algorithms currently have a limitation in handling the MOMDPs with nonconvex PFs. In this article, we propose a nonlinear MORL algorithm based on decomposition and variance reduction (MORL/D-VR) to overcome this limitation.

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Mercury and its compounds, particularly mercury chloride (HgCl), are highly toxic and persistent environmental pollutants. Understanding the adsorption behavior of HgCl in clay-water systems is essential for developing effective mercury remediation strategies. This study investigates the effects of pH and background cations on the adsorption kinetics, adsorption energy, and dipole moment of HgCl in montmorillonite clay systems.

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Background: Asthma is a chronic, heterogeneous disease driven by inflammatory phenotypes, primarily eosinophilic asthma (EA) and neutrophilic asthma (NEA). While allergen triggers are well-known, the role of the airway microbiome and metabolites in asthma exacerbations remains poorly understood.

Methods: We recruited 64 participants (24 EA, 20 NEA, 20 healthy controls [HC]) for the discovery cohort, with validation in an external cohort (10 EA, 8 NEA, 8 HC).

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Treatment of breast cancer (BC) remains to face clinical challenges due to poor tumor penetration of therapeutic agents, which is a direct consequence of the high content of hyaluronan (HA) within the extracellular matrix (ECM) of tumor tissues. Herein, we reported the synthesis of phototherapy liposomes which integrated hyaluronidase (HAase) conjugated with a matrix metalloproteinase 2 (MMP-2) responsive peptide in their phospholipid membrane, and preloaded with indocyanine green (ICG), CaO, and L-buthionine sulfoximine (BSO). Under near-infrared (NIR) laser irradiation, the responsive release of HAase and photodynamic therapy (PDT) effect generated by ICG enabled the controlled degradation of HA in the ECM.

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Symmetry is a widespread phenomenon in nature. Recognizing symmetry can minimize redundancy to improve computing efficiency. In this paper, we take permutation-related combinatorial optimization problems as a starting point and explore the symmetric structure of its solution space through group theory.

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Advanced high strength steels (AHSS) exhibit diverse mechanical properties due to their complex chemical compositions and microstructures. Existing machine learning (ML) studies often focus on specific steel grades, limiting generalizability in predicting and optimizing AHSS properties. Here, an ML framework was presented to predict and optimize the stretch-flangeability of AHSS based on composition-microstructure-property correlations, using datasets from 212 steel conditions.

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This study establishes a homogeneous half-space and a horizontally layered two-layer background stratigraphy model using cross-borehole electrical resistivity tomography (ERT) based on an incomplete Gauss-Newton (IGN) method to investigate the resistivity inversion characteristics of CO storage zones. The effects of storage zone volume (VCO2), storage zone resistivity (ρCO2), background formation resistivity (ρf), and CO diffusion on inversion results were systematically analyzed, and the mechanisms underlying the influence of different parameters on inversion imaging were explored. The results indicate that an increase in the VCO2 significantly affects the inverted resistivity.

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Aim: To investigate the relationship between unsaturated fatty acids (UFAs) intake and the risk of all-cause mortality in osteoarthritis (OA) patients.

Methods: This cohort study included the data of 3,271 participants with OA using data from the National Health and Nutrition Examination Survey (NHANES). Univariate and multivariable weighted Cox regression models were applied to analyze the relationship between UFAs intake and the risk of mortality in patients with OA.

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Cancer immunotherapies, such as immune checkpoint inhibitors, have advanced rapidly and achieved notable success, yet they face significant challenges due to poor response rates and immune-related adverse effects, particularly in cases of triple-negative breast cancer (TNBC). Photodynamic therapy (PDT) can initiate immunogenic cell death (ICD) by inducing endoplasmic reticulum (ER) stress, thereby enhancing the effectiveness of tumor immunotherapy. Herein, we develop potent PDT biomimetic liposomes (PB Lipo) locating the ER to realize a synergistic immuno-photodynamic treatment.

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Waste cryolite generated during industrial aluminum smelting is rich in fluorine, posing significant risks to the environment. In this study, we propose a novel two-step method for efficiently synthesizing aluminum fluoride hydroxy hydrate (AFHH) from this waste, guided by chemical equilibrium modeling and density functional theory (DFT) calculations. This process involves the leaching of waste cryolite with Al(NO) and the subsequent alkalization of the leachate with NaOH.

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Background: Acute kidney injury (AKI) and acute kidney disease (AKD) are prevalent among pediatric patients, both linked to increased mortality and extended hospital stays. Early detection of kidney injury is crucial for improving outcomes. This study presents a machine learning-based risk prediction model for AKI and AKD in pediatric patients, enabling personalized risk predictions.

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Background: This study investigates the causal role of metabolites mediating immune cells in rheumatoid arthritis (RA) and ankylosing spondylitis (AS) through a Mendelian randomization (MR) study.

Methods: The two-sample and two-step MR methods were used for the current analysis: (1) causal effects of immune cells on RA and AS; (2) mediation effects of metabolites. Inverse variance weighted (IVW) is the main method to analyze causality, and MR results are verified by several sensitive analyses.

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Article Synopsis
  • Polyethylene terephthalate (PET) is a common plastic used in items like bags, bottles, and clothing, but its waste breaks down into harmful microplastics (MPs) that can infiltrate the environment and human bodies.
  • This study examined the male reproductive toxicity of PET MPs by exposing male mice to varying doses for 42 days, observing significant damage to testicular tissues and sperm quality, driven by oxidative stress and activation of the p38 signaling pathway.
  • Treatments with N-acetylcysteine (NAC) and SB203580 showed that blocking oxidative stress and the p38 pathway significantly reduced reproductive damage, highlighting the need for better public health strategies regarding microplastics.
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Article Synopsis
  • Protein-Protein Interactions (PPIs) are crucial for many biological processes, and current computational methods, especially deep learning, face challenges in predicting them efficiently due to imbalanced data and high computational costs.
  • The proposed BaPPI model uses an innovative anti-symmetric graph learning approach to achieve better PPI predictions by balancing data representation and simplifying complex dependencies, outperforming existing methods in accuracy.
  • BaPPI's code is available for public use, making it accessible for further research and applications in PPI prediction.
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The article by Shin et al. provides valuable insights into the correlation between the gastric mucosa-associated gastric microbiome (MAM) and metachronous recurrence. However, the use of the Cox proportional hazards model in their analysis presents several limitations.

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Recent research has indicated that formononetin demonstrates a potent anti-inflammatory effect in various diseases. However, its impact on sterile inflammation kidney injury, specifically acute kidney injury (AKI), remains unclear. In this study, we utilized an ischemia/reperfusion-induced AKI (IRI-AKI) mouse model and bone marrow-derived macrophages (BMDMs) to investigate the effects of formononetin on sterile inflammation of AKI and to explore the underlying mechanism.

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Article Synopsis
  • * Key findings indicate that SWR is significantly higher in secondary forest, orchard, and riverbank compared to cropland, while soil organic carbon (SOC) is greatest in secondary forest and lowest in grassland and cropland.
  • * The study shows relationships between soil properties: SWR correlates positively with SOC and certain soil aggregates, while soil erodibility (K) has a negative correlation with aggregate diameter, highlighting how land use impacts soil characteristics.
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Background: Application of indocyanine green (ICG) fluorescence has led to new developments in gastrointestinal surgery. However, little is known about the use of ICG for the diagnosis of postoperative gut leakage (GL). In addition, there is a lack of rapid and intuitive methods to definitively diagnose postoperative GL.

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Background: Research into the acute kidney disease (AKD) after acute ischemic stroke (AIS) is rare, and how clinical features influence its prognosis remain unknown. We aim to employ interpretable machine learning (ML) models to study AIS and clarify its decision-making process in identifying the risk of mortality.

Methods: We conducted a retrospective cohort study involving AIS patients from January 2020 to June 2021.

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The therapy of the clear cell renal cell carcinoma (ccRCC) is crucial for the human healthcare due to its easy metastasis and recurrence, as well as resistance to radiotherapy and chemotherapy. In this work, we propose the synthesis of MoS@red phosphorus (MoS@RP) heterojunction to induce synergistic photodynamic and photothermal therapy (PDT/PTT) of ccRCC. The MoS@RP heterojunction exhibits enhanced spectra absorption in the NIR range and produce local heat-increasing under the NIR laser irradiation compared with pure MoS and RP.

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DNA damage response (DDR) plays a vital role in the development of cancer. Nevertheless, in osteosarcoma, the potential of DDR-related genes (DDRGs) remains unclear. Thus, the current research is intended to investigate the mechanisms of DDRGs in the development of osteosarcoma and to explore potential DDR-related biomarkers in forecasting the prognosis of osteosarcoma patients.

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Clear cell renal cell carcinoma (ccRCC) is a disease with high incidence and poor prognosis. The conventional treatment involves radiotherapy and chemotherapy, but chemotherapeutic agents are often associated with side effects, , cytotoxicity to nontumor cells. Therefore, there is an urgent need for the development of novel therapeutic strategies for ccRCC.

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Synopsis of recent research by authors named "Tianyang Li"

  • - Tianyang Li's recent research encompasses a diverse range of biomedical topics, including the development of computational frameworks for predicting protein-protein interactions and exploring novel therapeutic strategies for renal cell carcinoma.
  • - The studies address significant challenges in the biomedical field, such as the imbalance in data characteristics influencing protein interactions and the efficacy of personalized treatments for conditions like ischemic stroke and osteosarcoma.
  • - Additionally, Li's work investigates the effects of environmental factors on soil and water management, as well as the role of immune responses in osteoarthritis, showcasing an interdisciplinary approach to addressing complex biological and ecological problems.