Publications by authors named "Senthilkumar Muthusamy"

Article Synopsis
  • The study focuses on the pathogenic dikaryon phase of the fungus Tilletia indica Mitra, which causes Karnal bunt (KB) in wheat, by providing draft genomes of the dikaryon and its two monosporidial lines and conducting comparative genome analysis.
  • Researchers performed transcriptome analyses on infected wheat grains at various time intervals after inoculation to identify genes involved in both the disease-causing dikaryon and the wheat’s response to infection.
  • Findings from this study are compiled in the TiGeR web resource, offering valuable genomic data and insights that could aid in managing Karnal bunt in wheat and in developing resistant wheat strains.
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  • * Phylogenetic studies categorized the identified MeHsp70 proteins into eight distinct groups and promoter analysis highlighted their tissue-specific functions and responses to light and stress.
  • * Meta-analysis revealed varied expression patterns of these genes under different stress conditions, with some showing consistent expression while others were specifically responsive to drought and cold stress, along with predictions of regulation by miRNAs.
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  • Nitrogen (N) is a crucial nutrient for plant growth and is the most commonly used fertilizer in agriculture, but only about 50% of applied N is effectively used by crops.
  • Excess nitrogen is lost through processes like volatilization, runoff, leaching, and denitrification, which harms the environment and reduces farmers' returns.
  • Improving Nitrogen Use Efficiency (NUE) through better management practices and technological advancements is essential for reducing environmental impacts and meeting agricultural demands sustainably.
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  • BREVIS RADIX (BRX) is a specific gene family in plants that plays a crucial role in regulating root growth and tiller angle, which are important for improving crops.
  • The study identified five BRX family genes in wheat, revealing their evolutionary conservation and different levels of expression in various tissues, with TaBRXL1 being the most abundantly expressed.
  • The expression patterns of these genes in response to biotic and abiotic stresses suggest they have distinct yet overlapping functions, supported by their protein interactions and a global co-expression network.
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  • The COVID-19 pandemic prompted scientists to investigate various therapies, leading to unexpected insights and mixed results.
  • One notable focus has been on using mesenchymal stromal cells (MSCs) and their derived extracellular vesicles (EVs), particularly exosomes, to combat severe immune reactions and repair lung damage.
  • The review emphasizes promising data indicating that MSC-derived EVs could be an effective treatment for acute lung injury related to COVID-19, with implications for broader medical applications.
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Liver parenchymal microtissues (LPMTs) are three-dimensional (3D) aggregates of hepatocytes that recapitulate in vivo-like cellular assembly. They are considered as a valuable model to study drug metabolism, disease biology, and serve as ideal building blocks for liver tissue engineering. However, their integration into the mainstream drug screening process has been hindered due to the lack of simple, rapid techniques to produce a large number of uniform microtissues and preserve their structural-functional integrity over the long term.

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Cardiac mesenchymal cells (CMCs) are a promising cell type that showed therapeutic potential in heart failure models. The analysis of the underlying mechanisms by which the CMCs improve cardiac function is on track. This study aimed to investigate the expression of N-Cadherin, a transmembrane protein that enhances cell adhesion, and recently gained attention for differentiation and augmentation of stem cell function.

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Bacterial infection remains a great challenge in wound healing, especially in chronic wounds. Multidrug-resistant organisms are increasing in acute and chronic wound infections, which compromise the chance of therapeutics. Resistance to conventional antibiotics has created an urge to study new approach/system that can effectively control wound infection and enhance healing.

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Bioprinting three-dimensional (3D) tissue equivalents have progressed tremendously over the last decade. 3D bioprinting is currently being employed to develop larger and more physiologic tissues, and it is of particular interest to generate vasculature in biofabricated tissues to aid better perfusion and transport of nutrition. Having an advantage over manual culture systems by bringing together biological scaffold materials and cells in precise 3D spatial orientation, bioprinting could assist in placing endothelial cells in specific spatial locations within a 3D matrix to promote vessel formation at these predefined areas.

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  • Maintenance of growth is crucial for sustaining crop yields under stress, making the identification of genes related to cell division and growth essential, especially under abiotic stress conditions.* -
  • The study identified two Ran GTPase genes, TaRAN1 and TaRAN2, in wheat, which play roles in nucleocytoplasmic transport and are involved in growth during various developmental stages and stress responses.* -
  • Expression analysis revealed that TaRAN1 has a more consistent expression across different conditions, while TaRAN2 exhibits stress-specific responses; both genes respond differently to drought, cold, and salt stress.*
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In the adult tissues, blood vessels traverse the body with neurons side by side; and share common signaling molecules. Developmental studies on animal models have shown that peripheral sensory neurons (PSNs) secrete angiogenic factors and endothelial cells (ECs) secrete neurotrophic factors which contribute to their coexistence, thereby forming the peripheral neurovascular (PNV) unit. Despite the large number of studies showing that innervation and vascularization complement each other, the interaction between human PSNs and ECs is still largely unknown.

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Salt stress adversely affects the global wheat production and productivity. To improve salinity tolerance of crops, identification of robust molecular markers is highly imperative for development of salt-tolerant cultivars to mimic yield losses under saline conditions. In this study, we mined 171 salt-responsive genes (including 10 miRNAs) from bread wheat genome using the sequence information of functionally validated salt-responsive rice genes.

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Being a major staple food crop of the world, wheat provides nutritional food security to the global populations. Heat stress is a major abiotic stress that adversely affects wheat production throughout the world including Indo-Gangatic Plains (IGP) where four wheat growing countries viz., India, Bangladesh, Nepal and Pakistan produce 42% of the total wheat production.

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Although cardiac mesenchymal cell (CMC) therapy mitigates post-infarct cardiac dysfunction, the underlying mechanisms remain unidentified. It is acknowledged that donor cells are neither appreciably retained nor meaningfully contribute to tissue regeneration-suggesting a paracrine-mediated mechanism of action. As the immune system is inextricably linked to wound healing/remodeling in the ischemically injured heart, the reparative actions of CMCs may be attributed to their immunoregulatory properties.

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  • Post-translational modifications, particularly O-GlcNAcylation, play a significant role in ventricular remodeling within the cardiovascular system.
  • The study investigates the impact of E2F1 deletion on O-GlcNAc transferase (OGT) and O-GlcNAcase (OGA) expression and the resulting effects on cardiac function after a myocardial infarction (MI).
  • E2F1 deletion improves cardiac function post-MI without changing OGT and OGA expression levels, and leads to increased heart size and capillary density, suggesting E2F1 negatively influences ventricular remodeling.
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Imparting cold stress tolerance to crops is a major challenge in subtropical agriculture. New genes conferring cold tolerance needs to be identified and characterised for sustainable crop production in low-temperature stress affected areas. Here we report functional characterisation of OsRBGD3, classified previously as a class D glycine-rich RNA recognition motif (RRM) containing proteins from a drought-tolerant Indica rice cultivar N22.

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Although cell therapy improves cardiac function after myocardial infarction, highly variable results and limited understanding of the underlying mechanisms preclude its clinical translation. Because many heart failure patients are diabetic, we examined how diabetic conditions affect the characteristics of cardiac mesenchymal cells (CMC) and their ability to promote myocardial repair in mice. To examine how diabetes affects CMC function, we isolated CMCs from non-diabetic C57BL/6J (CMC) or diabetic B6.

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  • Photosynthetic fixation of CO is more efficient in C4 plants compared to C3 plants, and rice, being a C3 plant, is a candidate for genetic engineering to adopt C4 traits.
  • This study identified 15 C4-related genes in the rice genome through comparison with known maize genes and found that these genes are conserved across various grass species.
  • The analysis of gene expression in different rice genotypes and conditions indicated that these C4 genes respond to stress and hormone treatments, suggesting their potential for enhancing rice resilience through CRISPR-based modifications.
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Abscisic acid (ABA) plays an important role in plant development and adaptation to abiotic stresses. The pyrabactin resistance-like (PYL) gene family has been characterized as intracellular ABA receptors in Arabidopsis. We describe here the functional characterization of PYL3 ABA receptor from a drought-tolerant rice landrace Nagina 22 (N22).

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Supernumerary teeth are hyperdontic variants due to abnormalities during tooth development. Here, we report a case on regeneration of bony defect, which ensued following extraction of two supernumerary teeth in the mandibular premolar region, using a combination of bone grafts and platelet-rich fibrin. To the best of our knowledge, it is the first time synergistic use of biomaterials with bone grafts have been used for this type of management.

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Context: Comprehensive reviews on clinical applications of Platelet rich fibrin (PRF) in surgery are limited despite its extensive utilization resulting in a dearth of knowledge on its effectiveness. Hence this article focuses on shedding light to the various applications of PRF pertaining to surgery through a systematic review.

Objective: The systematic review is aimed at evaluating the value of PRF in different areas of surgery.

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Background: The authors previously reported that the c-kit-positive (c-kit) cells isolated from slowly adhering (SA) but not from rapidly adhering (RA) fractions of cardiac mesenchymal cells (CMCs) are effective in preserving left ventricular (LV) function after myocardial infarction (MI).

Objectives: This study evaluated whether adherence to plastic alone, without c-kit sorting, was sufficient to isolate reparative CMCs.

Methods: RA and SA CMCs were isolated from mouse hearts, expanded in vitro, characterized, and evaluated for therapeutic efficacy in mice subjected to MI.

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Article Synopsis
  • The study investigates the role of O-GlcNAcylation in heart muscle (cardiomyocyte) response to pressure overload, specifically in hypertrophy, using both patient tissues and a mouse model of heart failure.
  • Elevated levels of O-GlcNAcylation were found in heart failure patients, and deletion of the Ogt gene in mice led to decreased O-GlcNAcylation and worsened heart function without major changes in metabolic genes or visible fibrosis/hypertrophy.
  • Although Ogt is not necessary for hypertrophy, its absence may cause subtle changes that make the heart more vulnerable to dysfunction under pressure overload conditions.
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  • Small Heat Shock Proteins (sHSPs)/HSP20 help plants withstand abiotic stresses, particularly heat stress, which poses a significant threat to wheat productivity due to climate change.
  • Researchers identified 163 TaHSP20 genes in wheat by analyzing related sequences from rice and Arabidopsis and categorized them based on sub-cellular location and genetic relationships with other grass species.
  • The expression patterns of these genes were explored, revealing their activation under various stresses, with specific genes showing high expression in response to salt and heat, indicating their potential role in enhancing wheat's stress tolerance.
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Karnal bunt disease caused by the fungus Tilletia indica Mitra is a serious concern due to strict quarantines affecting international trade of wheat. We announce here the first draft assembly of two monosporidial lines, PSWKBGH-1 and -2, of this fungus, having approximate sizes of 37.46 and 37.

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