Publications by authors named "Junyuan Lin"

The egg-laying interval reflects the laying performance of pigeons and is affected by the mechanism of ovulation. The Forkhead box O3 (FOXO3) gene is closely associated with follicular development, playing roles in the regulation of follicular granulocyte proliferation, differentiation and periodic ovulation. The objective of this research was to analyze associations of polymorphisms of FOXO3 gene with egg-laying intervals in pigeon.

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The mud crab (Scylla paramamosain) is a major aquaculture species in southeastern China. However, intensifying farming has led to disease outbreaks, with Vibrio parahaemolyticus (Vp) infections causing high mortality and economic losses. Although gut microbiota is important for host health, its response to artificial Vp challenge in mud crabs remains poorly understood.

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Gene-environment interactions are pivotal contributors to nitrosamine-induced esophageal carcinogenesis. While genetic mechanisms in esophageal carcinoma (ESCA) are well-defined, epigenetic drivers remain elusive. This study identifies a novel mechanism of epigenetic regulation centered on B-cell lymphoma-2-associated transcription factor 1 (Bclaf1) in nitrosamine-induced (Methylnitronitrosoguanidine, MNNG) esophageal carcinogenesis.

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Pacific white shrimp () is one of the most productive and economically important species globally. However, the development and continuous expansion of the farming scale led to an increase in the risk of disease occurrence in shrimp farming. The application of probiotics as an effective method for controlling diseases in aquaculture has been widely considered.

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Background: Geographic, demographic, and socioeconomic differences in health outcomes persist despite the global focus on these issues by health organizations. Barriers to accessing care contribute significantly to these health disparities. Among these barriers, those related to travel time-the time required for patients to travel from their residences to health facilities-remain understudied compared with others.

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The skeletal muscle is the major muscle tissue in animals, and its production is subject to a complex and strict regulation. The proliferation and differentiation of myoblasts are important factors determining chicken muscle development. Circular RNAs (circRNAs) are endogenous RNAs that are widely present in various tissues of organisms.

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Breast cancer is a multifactorial heterogeneous disease and the leading cause of cancer-related deaths in women; its diagnosis and treatment require clinical sensitivity and a comprehensive disciplinary research approach. The expression of different receptors on tumor cells not only provides the basis for molecular typing of breast cancer but also has a decisive role in the diagnosis, treatment, and prognosis of breast cancer. To date, immunohistochemistry (IHC), which uses invasive histological sampling, has been extensively used in clinical practice to analyze the status of receptors and to make an accurate diagnosis of breast cancer.

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The quality and quantity of animal meat are closely related to the development of skeletal muscle, which, in turn, is determined by myogenic cells, including myoblasts and skeletal muscle satellite cells (SMSCs). Circular RNA, an endogenous RNA derivative formed through specific reverse splicing in mRNA precursors, has the potential to influence muscle development by binding to miRNAs or regulating gene expression involved in muscular growth at the transcriptional level. Previous high-throughput sequencing of circRNA in chicken liver tissue revealed a circular transcript, circIGF2BP3, derived from the gene encoding insulin-like growth factor 2 mRNA binding protein 3 (IGF2BP3).

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Article Synopsis
  • Esophageal cancer (EC) is a major health issue globally, with nitrosamines being a key risk factor; understanding their mechanisms could aid in prevention and detection.
  • Ribonucleic acid export 1 (RAE1) was found to be overexpressed in the early stages of nitrosamine-induced carcinogenesis and plays a crucial role in cell proliferation and cycle regulation.
  • The study shows that RAE1 influences lipid metabolism by stabilizing PPARα mRNA, linking it to the progression of esophageal cancer and providing new insights into its carcinogenic mechanisms.
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Ovulation is a complicated physiological process that is regulated by a multitude of different pathways. In comparison to mammalian studies, there are few reports of ovulation in Muscovy ducks, and the molecular mechanism of ovarian development remained unclear. In order to identify candidate genes and metabolites related to Muscovy duck follicular ovulation, the study combined Oxford Nanopore Technologies (ONT) full-length transcriptome and metabolomics to analyze the differences in gene expression and metabolite accumulation in the ovaries between pre-ovulation (PO) and consecutive ovulation (CO) Muscovy ducks.

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Article Synopsis
  • This study focuses on understanding ovulation mechanisms in Muscovy ducks, an area that has limited research compared to mammals.
  • Researchers used Oxford Nanopore Technologies to generate transcriptome data from different groups of female duck ovaries based on their ovulation patterns (preovulation, consecutive ovulation, and inconsecutive ovulation).
  • The analysis identified over 24,000 full-length transcripts and highlighted key genes and pathways—such as CTNNB1, IGF1, and the mTOR pathway—that may play significant roles in regulating ovulation, contributing valuable data for future genetic and breeding studies to enhance reproduction in Muscovy ducks.
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Article Synopsis
  • Various bioinformatics methods exist to simplify complex gene and protein networks into relevant subnetworks, but there is limited understanding of how they compare in identifying disease-related modules.
  • The 'Disease Module Identification DREAM Challenge' was launched as an open competition to evaluate these methods across various network types, using data from 180 genome-wide association studies to test the predicted modules' relevance to complex traits and diseases.
  • The assessment of 75 different module identification methods identified top-performing algorithms, revealing that most modules correspond to key disease-related pathways and potential therapeutic targets, providing valuable benchmarks and guidelines for studying human disease biology.
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Objective To investigate the effect of Pleurotus ferulae polysaccharide (PFP) as an adjuvant on the infertility induced by canine zona pellucida 3 (CZP3) DNA vaccine (pcDNA3-CZP3). Methods Female mice were intramuscularly immunized with pcDNA3-CZP3 alone or co-immunized with pcDNA3-CZP3 and aluminum adjuvant or PFP for three times. CZP3-specific antibody titers of antiserum were determined by ELISA.

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