Publications by authors named "Dongyan Shi"

Objectives: To establish patterns of the antimicrobial susceptibility of Nocardia species to carbapenems and fluoroquinolones and analysis of phenotypic-genotypic correlations.

Methods: Isolates were identified to the species using 16S rRNA, secA1, or rpoB gene sequencing analysis. The antimicrobial susceptibility testing was performed using the broth microdilution method, and WGS was employed to analyse the presence of resistance genes and/or mutations of Nocardia species against carbapenems and fluoroquinolones.

View Article and Find Full Text PDF

Background: Acute-on-chronic liver failure (ACLF) is a life-threatening syndrome involving dysfunction of multiple immune cell types.

Objective: This study aimed to comprehensively depict the dynamic trajectory of immune responses throughout the disease course of HBV-related ACLF (HBV-ACLF).

Design: Single-cell RNA sequencing and single-cell proteomics were performed on the peripheral blood mononuclear cells of 45 samples from 17 patients who were hospitalised (progressive/stable/recovering course of HBV-ACLF, 6/5/6) and 15 control subjects (liver cirrhosis, chronic hepatitis B and healthy controls, 5/5/5).

View Article and Find Full Text PDF

Background: Trained immunity with human bone marrow mesenchymal stem cells (hBMSC) is a promising approach to liver regeneration. This study aimed to clarify the trained-hBMSC (T-hBMSC) in restoring tissue immuno-microenvironment in fulminant hepatic failure (FHF) mice.

Methods: hBMSC trained with tumor necrosis factor-α and interferon-γ were phenotypically characterized in vitro.

View Article and Find Full Text PDF

Background: Acute-on-chronic liver failure (ACLF) of various aetiologies is a complex syndrome with high short-term mortality and significant global burden.

Objective: To explore easily applicable diagnostic criteria and an accurate prognostic score for ACLF.

Design: Clinical data from 5288 patients (after exclusions from 7388 screened) with acute deterioration of chronic liver disease across various aetiologies were used to evaluate the performance of European Chronic Liver Failure (CLIF) and Chinese Group on the Study of Severe Hepatitis B (COSSH) criteria.

View Article and Find Full Text PDF

Sevoflurane, a widely used volatile anesthetic, has been associated with neurodevelopmental impairments in neonates, particularly in the context of hypoxic-ischemic (HI) brain injury. In this study, we investigated the effects of sevoflurane exposure on cognitive function and myelination using a preterm white matter injury (WMI) mouse model. Postnatal day 3 (P3) mice underwent HI induction followed by 3.

View Article and Find Full Text PDF

The residual stress induced during the processing of titanium alloy materials can significantly influence the deformation control of precision-machined workpieces, especially for workpieces characterized by low stiffness and high-precision requirements. In this study, TC18 titanium alloy forgings with a dense structure were manufactured via forging. By conducting turning and heat treatment experiments on the workpiece, the distribution and evolution of residual stress and the deformation characteristics of TC18 titanium alloy on slender shafts were systematically investigated under different turning and heat treatment conditions.

View Article and Find Full Text PDF

Background: Acute-on-chronic liver failure (ACLF) is a complicated syndrome associated with high short-term mortality and reversibility. Whether the prior decompensation should be included in the definition of ACLF is controversial.

Methods: A total of 532 patients with decompensation (prior or first) of chronic liver disease were retrospectively enrolled and analyzed from January 2018 to June 2023.

View Article and Find Full Text PDF
Article Synopsis
  • Patients with HBV-ACLF face a high risk of mortality, and the study investigates the role of semaphorin-6B (SEMA6B) in its progression.
  • The research involved 321 subjects, with specific focus on mRNA sequencing of PBMCs from 84 participants, revealing SEMA6B as a key gene linked to inflammation and apoptosis in HBV-ACLF patients.
  • Findings showed that higher SEMA6B levels correlated with worse outcomes, and its suppression in mice improved liver function and reduced inflammation, suggesting it could be a potential target for therapeutic intervention.
View Article and Find Full Text PDF

The similarity test of ship stiffened plate structures under underwater explosions is a cost-effective and efficient method to evaluate the vitality of ships and guide the design of their shock resistance. This study focuses on the nonlinear impact response model tests of ship stiffened plate structures and their similarity laws with actual ships. The vertical motion of the ship stiffened plate structure is characterized by the Hurst index, and an equivalent relationship between the Hurst index of the model and the prototype is derived from classical similarity law.

View Article and Find Full Text PDF

Objective: To define the antifungal activity of n-butylphthalide alone or in combination with fluconazole in and .

Methods: The antifungal activity of n-butylphthalide alone and in combination with fluconazole was investigated by the classical broth microdilution method and the time-killing curve method. The QRT-PCR method was used to determine gene expressions changes of mitochondrial respiratory chain enzymes, drug efflux pumps and drug target enzymes in and after n-butylphthalide treatment.

View Article and Find Full Text PDF

Background And Aim: Hepatitis B virus-related acute-on-chronic liver failure (HBV-ACLF) is a complicated syndrome with high short-term mortality. Effective biomarkers are required for its early diagnosis and prognosis. This study aimed to determine the diagnostic and prognostic value of thrombomodulin (TM) in patients with HBV-ACLF.

View Article and Find Full Text PDF

Background: , a pathogen known for its strong pathogenicity, is frequently implicated in skin, central nervous system, and lung infections among immunosuppressed hosts, while intestinal nocardiosis is rare. We report the case of infectious diarrhea caused by in a child.

Case Presentation: A 19-month-old female child was admitted to the hospital with fever and diarrhea after the consumption of oranges.

View Article and Find Full Text PDF

Background: The key role of thrombospondin 1 (THBS1) in the pathogenesis of acute-on-chronic liver failure (ACLF) is unclear. Here, we present a transcriptome approach to evaluate THBS1 as a potential biomarker in ACLF disease pathogenesis.

Methods: Biobanked peripheral blood mononuclear cells (PBMCs) from 330 subjects with hepatitis B virus (HBV)-related etiologies, including HBV-ACLF, liver cirrhosis (LC), and chronic hepatitis B (CHB), and normal controls (NC) randomly selected from the Chinese Group on the Study of Severe Hepatitis B (COSSH) prospective multicenter cohort underwent transcriptome analyses (ACLF = 20; LC = 10; CHB = 10; NC = 15); the findings were externally validated in participants from COSSH cohort, an ACLF rat model and hepatocyte-specific THBS1 knockout mice.

View Article and Find Full Text PDF

Background & Aims: HBV-related acute-on-chronic liver failure (HBV-ACLF) is a complex syndrome associated with high short-term mortality. This study aims to reveal the molecular basis and identify novel HBV-ACLF biomarkers.

Methods: Seventy patients with HBV-ACLF and different short-term (28 days) outcomes underwent transcriptome sequencing using peripheral blood mononuclear cells.

View Article and Find Full Text PDF
Article Synopsis
  • IL-33 is identified as an alarmin that plays a crucial role in immune response and is linked to the development of renal interstitial fibrosis.
  • The study found increased levels of IL-33 and its receptor IL1RL1 (ST2) in human fibrotic kidney tissues, while IL-33 or ST2-deficient mice showed reduced markers associated with fibrosis.
  • In HK-2 cells, IL-33 enhances TGF-β receptor signaling, leading to increased extracellular matrix production and reduced E-cadherin levels, suggesting that IL-33 and TGF-β signaling work together to promote renal fibrosis.
  • Targeting the IL-33/ST2 pathway could offer a promising therapeutic approach for treating renal fibrosis.
View Article and Find Full Text PDF

Developing functional ductal organoids (FDOs) is essential for liver regenerative medicine. We aimed to construct FDOs with biliary tree networks in rat decellularized liver scaffolds (DLSs) with primary cholangiocytes isolated from mouse bile ducts. The developed FDOs were dynamically characterized by functional assays and metabolomics for bioprocess clarification.

View Article and Find Full Text PDF

Hepatitis B virus-related acute-on-chronic liver failure (HBV-ACLF) is a syndrome with high short-term mortality. The mechanism of the transcription factor ETS2 in ACLF remains unclear. This study aimed to clarify the molecular basis of ETS2 in ACLF pathogenesis.

View Article and Find Full Text PDF

Functional bioengineered livers (FBLs) are promising alternatives to orthotopic liver transplantation. However, orthotopic transplantation of FBLs has not yet been reported. This study aimed to perform the orthotopic transplantation of FBLs in rats subjected to complete hepatectomy.

View Article and Find Full Text PDF

Tumor recurrence is an important factor indicative of a poor prognosis in glioblastoma (GBM). Many studies are attempting to identify effective therapeutic strategies to prevent the recurrence of GBM after surgery. Bioresponsive therapeutic hydrogels capable of sustaining locally released drugs are frequently used for the local treatment of GBM after surgery.

View Article and Find Full Text PDF

Objectives: This study aimed to investigate the microbiological characteristics, antimicrobial resistance profiles, antibiotic choice, and outcomes of Nocardia infection in various centers over a 7-year period (from 2015 to 2021).

Methods: We retrospectively analyzed the medical records of all hospitalized patients diagnosed with Nocardia between 2015 and 2021. The isolates were identified to the species level through the sequencing of 16S ribosomal RNA or secA1 or ropB genes.

View Article and Find Full Text PDF

Background And Aims: Human bone marrow mesenchymal stem cells (hBMSCs) are important for developing a dual-humanized mouse model to clarify disease pathogenesis. We aimed to elucidate the characteristics of hBMSC transdifferentiation into liver and immune cells.

Methods: A single type of hBMSCs was transplanted into immunodeficient Fah-/- Rag2-/- IL-2Rγc-/- SCID (FRGS) mice with fulminant hepatic failure (FHF).

View Article and Find Full Text PDF

Background: Liver transplantation (LT) is an effective therapy for acute-on-chronic liver failure (ACLF) but is limited by organ shortages. We aimed to identify an appropriate score for predicting the survival benefit of LT in HBV-related ACLF patients.

Methods: Hospitalized patients with acute deterioration of HBV-related chronic liver disease (n = 4577) from the Chinese Group on the Study of Severe Hepatitis B (COSSH) open cohort were enrolled to evaluate the performance of five commonly used scores for predicting the prognosis and transplant survival benefit.

View Article and Find Full Text PDF

Background: Immune-checkpoint inhibitors (ICIs) remain ineffective in a large group of non-small cell lung cancer (NSCLC) patients. Mucosal-associated invariant T (MAIT) cells, a population of unconventional innate-like T lymphocytes abundant in the human body, play important roles in human malignancies. Little is known about the immune characteristics of MAIT cells in NSCLC and correlation with prognosis and response rate of ICIs treatment.

View Article and Find Full Text PDF