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The abscisic acid (ABA) signaling pathway depends largely on ABRE-binding factors (ABFs), a distinct subfamily of plant bZIP transcription factors. Here, we carried out a genome-wide analysis of the ABF gene family in soybean (Glycine max (L.) Merr.) and investigated the function and regulatory mechanisms of GmABF1 in the plant's response to salt stress. A total of 20 GmABF genes were identified in the soybean genome, distributed across various chromosomes. The gene expression profiles of GmABF genes across diverse tissues and developmental stages in soybean indicate in regulating abiotic stress responses and plant hormone signaling. Among these genes, GmABF1 emerged as a key regulator of salt-stress tolerance. Functional assays showed that GmABF1 overexpression limited Na accumulation, reduced membrane damage, lowered reactive oxygen species (ROS) levels, and up-regulated ROS-scavenging enzymes, collectively alleviating oxidative stress and enhancing the plant's resilience to salinity. Additionally, three polymorphic sites in the promoter region of GmABF1 were identified, and their variation was closely associated with salt tolerance in soybean. These findings highlight the regulatory role of GmABF1 in salt stress responses and its potential for improving soybean stress tolerance.
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http://dx.doi.org/10.1016/j.ijbiomac.2025.144763 | DOI Listing |
Genome Biol
September 2025
National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, 430070, China.
Background: Soil salinization represents a critical global challenge to agricultural productivity, profoundly impacting crop yields and threatening food security. Plant salt-responsive is complex and dynamic, making it challenging to fully elucidate salt tolerance mechanism and leading to gaps in our understanding of how plants adapt to and mitigate salt stress.
Results: Here, we conduct high-resolution time-series transcriptomic and metabolomic profiling of the extremely salt-tolerant maize inbred line, HLZY, and the salt-sensitive elite line, JI853.
J Genet Genomics
September 2025
State Key Laboratory of Tropical Crop Breeding, Shenzhen Branch, Guangdong Laboratory of Lingnan Modern Agriculture, Key Laboratory of Synthetic Biology, Ministry of Agriculture and Rural Affairs, Agricultural Genomics Institute at Shenzhen, Chinese Academy of Agricultural Sciences, Shenzhen, Guangd
The genetic basis of early-stage salt tolerance in alfalfa (Medicago sativa L.), a key factor limiting its productivity, remains poorly understand. To dissect this complex trait, we integrate genome-wide association study (GWAS) and transcriptomics (RNA-seq) from 176 accessions within a machine learning based genomic prediction framework.
View Article and Find Full Text PDFExp Gerontol
September 2025
Department of Nutrition and Integrative Physiology, University of Utah, Salt Lake City, UT, USA; Salk Institute for Biological Studies, La Jolla, CA, 92037, USA; Department of Molecular Biology, University of Utah, Salt Lake City, UT, USA; Department of Biochemistry, University of Utah, Salt Lake Ci
Aging is the greatest risk factor for cardiovascular diseases (CVD) and is characterized by inflammation, oxidative stress, and cellular senescence. Cellular senescence is a state of persistent cell cycle arrest triggered by stressors such as DNA damage and telomere attrition. Senescent endothelial cells (ECs) can impair vascular function and promote inflammation, thereby contributing to CVD progression.
View Article and Find Full Text PDFMol Cell Proteomics
September 2025
Systems Biology Initiative, School of Biotechnology & Biomolecular Sciences, UNSW Sydney, Australia; ARC Centre of Excellence for the Mathematical Analysis of Cellular Systems, UNSW Sydney, Australia. Electronic address:
Phosphorylation of histone lysine demethylases is an important mechanism by which the cell modulates chromatin dynamics to regulate its response to stress. There is evidence that the Saccharomyces cerevisiae H3K36me2/3 demethylase, Rph1p, is an integrator of many signalling events. However, the regulatory function of most Rph1p phosphosites in stress response pathways remains unknown.
View Article and Find Full Text PDFPlant Sci
September 2025
Key Laboratory of Coarse Cereal Processing, Ministry of Agriculture and Rural Affairs, Sichuan Engineering and Technology Research Center of Coarse Cereal Industrialization, Institute for Advanced Study, Chengdu University, Chengdu, Sichuan, China. Electronic address:
Rapid alkalinization factors (RALFs) are cysteine-rich signaling peptides in plants that play critical roles in development, immune regulation, and responses to abiotic stress. Despite their importance, the functional characterization of RALF family members in Tartary buckwheat (Fagopyrum tataricum), a nutrient-rich crop known for its remarkable resilience to multiple stresses, remains largely unexplored. In this study, we conducted a comprehensive genome-wide analysis to identify and characterize the FtRALF gene family in Tartary buckwheat, examining their phylogenetic relationships, gene structures, and duplication events.
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