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Purpose: This study investigates the causal mechanisms underlying radiology report generation by analyzing how clinical information and prior imaging examinations contribute to annotation shifts. We systematically estimate why and how biases manifest, providing insights into the data generation process that influences radiology reporting.
Methods: This retrospective study analyzes 172,380 chest X-ray reports from 45,561 distinct patients in the MIMIC-IV CXR database. The study focuses on conditional effects for the diseases pneumonia, pleurisy, heart failure, rib fracture, and COPD. Propensity score matching is employed to balance the treatment and control groups, followed by logistic regression and neural network models to estimate causal effects. Statistical analysis involves calculating risk differences and 95% confidence intervals to determine significance (p ≤ 0.05). Sensitivity analysis is deployed to estimate the robustness of the effect estimates.
Results: The inclusion of clinical questions significantly influences the reporting of key observational findings. For instance, the probability of mentioning cardiomegaly increases by 15% (p ≤ 0.05) when a clinical question is posed conditioned on rib fracture. Similar effects are observed for support devices across multiple diseases. However, the impact of clinical information varies by disease. For instance, in the presence of clinical questions, the mention of pneumonia increases significantly for one disease, while for others there is no significant effect.
Conclusion: This study demonstrates how annotation bias in radiology reports arises from clinical context and prior imaging access. Understanding these causal mechanisms is essential for mitigating biases in dataset curation, ensuring more reliable AI models, and improving the generalizability of multimodal medical imaging systems.
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http://dx.doi.org/10.1016/j.cmpb.2025.108810 | DOI Listing |
Mol Psychiatry
September 2025
Center for Gene Regulation in Health and Disease, Cleveland State University, Cleveland, OH, 44115, USA.
Dysregulated spine morphology is a common feature in the pathology of many neurodevelopmental and neuropsychiatric disorders. Overabundant immature dendritic spines in the hippocampus are causally related to cognitive deficits of Fragile X syndrome (FXS), the most common form of heritable intellectual disability. Recent findings from us and others indicate autophagy plays important roles in synaptic stability and morphology, and autophagy is downregulated in FXS neurons.
View Article and Find Full Text PDFSignal Transduct Target Ther
September 2025
Institute of Neuroscience, Center for Excellence in Brain Science and Intelligence Technology, Chinese Academy of Sciences, Shanghai, China.
Essential tremor (ET) is a common neurological disease that is characterized by 4-12 Hz kinetic tremors of the upper limbs and high genetic heterogeneity. Although numerous candidate genes and loci have been reported, the etiology of ET remains unclear. A novel ET-related gene was initially identified in a five-generation family via whole-exome sequencing, and other variants were identified in 772 familial ET probands and 640 sporadic individuals via whole-genome sequencing.
View Article and Find Full Text PDFGenome Res
September 2025
College of Life Science, Sichuan Agricultural University, Ya'an, 625014, People's Republic of China;
Poultry egg production is shaped by the intertwined action of multiple physiological systems, greatly magnifying the complexity of its underlying genetic regulation. Although multitissue mapping of regulatory variants offers a powerful route to untangle this complexity, comprehensive data sets in ducks remain scarce. Meanwhile, the contributions of peripheral systems beyond neuroendocrine regulation on poultry egg production are still largely unexplored.
View Article and Find Full Text PDFBiol Pharm Bull
September 2025
Department of Intensive Care Unit, Hangzhou TCM Hospital Affiliated to Zhejiang Chinese Medical University, Hangzhou, Zhejiang 310007, China.
Ferroptosis is involved in the progression of sepsis-induced acute lung injury (ALI). Kaempferol is a flavonoid compound that can protect against ALI. 5-Methylcytosine (m5C) is involved in the pathogenesis of sepsis.
View Article and Find Full Text PDFPhysiol Rep
September 2025
Department of Medicine, Dunedin School of Medicine, University of Otago, Dunedin, New Zealand.
Lithium-induced kidney injury is commonly associated with the development of nephrogenic diabetes insipidus. Longer term lithium exposure is associated with the development of chronic interstitial fibrosis. The mechanisms of lithium-induced kidney injury are multifaceted, affecting many intracellular cell signaling pathways associated with cell cycle regulation, cell proliferation, and subsequent increased extracellular matrix formation and interstitial fibrosis.
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