Nitrogen deposition mitigates ozone-induced stress in Quercus aliena: Transcriptomic and metabolomic perspectives.

Ozone (O) pollution poses an increasingly serious threat to forest ecosystems. To investigate the effects of O exposure on Quercus aliena and elucidate its defense mechanisms, we exposed Q. aliena to O and monitored its responses using physiological, transcriptomic, and metabolomic analyses. The results revealed that after 84 days of O exposure, the malondialdehyde (MDA) and proline contents in Q. aliena leaves significantly increased, while catalase (CAT) activity and soluble sugar content significantly decreased. Notably, N addition markedly alleviated O-induced oxidative stress. Integrated transcriptomic and metabolomic analyses revealed that N addition under O stress modulated metabolic pathways associated with flavonoid biosynthesis and amino acid metabolism. Specifically, O and N treatment increased the levels of rhoifolin, afzelechin, apigenin, luteoloside, kaempferol, and trifolin, while reducing the levels of phloretin, butin, cyanidin, taxifolin, myricetin, 2'-hydroxydaidzein, laricitrin, quercetin, prunin, luteolin, eriodictyol, quercitrin, and dihydromyricetin. Additionally, the co-treatment elevated the concentrations of L-glutamine, arginine, and ornithine, along with the levels of enzymes closely related to their synthesis, such as glnA (Uni0006561, Uni0006562, Uni0077758, Uni0101990), GSH (Uni0086646, Uni0101788), GSS (Uni0037737), and GCLC (Uni0034253). This study elucidates the metabolic alterations in Q. aliena under combined O and N treatments, highlighting changes in flavonoid biosynthesis and amino acid metabolism pathways. Using a multi-omics approach, we provide comprehensive insights into the responses of Q. aliena to O stress and N addition, offering significant implications for the management and conservation of forest ecosystems under environmental stress.