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Trophic interactions in micro-food webs, such as those between nematodes and their bacterial prey, affect nitrogen cycling in soils, potentially changing nitrous oxide (NO) production and consumption. However, how nematode-mediated changes in soil bacterial community composition affect soil NO emissions is largely unknown. Here, microcosm experiments are performed with the bacterial feeding nematode Protorhabditis to explore the potential of nematodes in regulating microbial communities and thereby soil NO emissions. Removal of nematodes by defaunation resulted in increased NO emissions, with the removal of Protorhabditis contributing most to this increase. Further, inoculation with Protorhabditis altered bacterial community composition and increased the relative abundance of Bacillus, and the abundance of the nosZ gene in soil. In vitro experiments indicated that Protorhabditis reinforce the reduction in NO emissions by Bacillus due to suppressing competitors and producing bacteria growth stimulating substances such as betaine. The results indicate that interactions between nematodes and bacteria modify NO emissions providing the perspective for the mitigation of greenhouse gas emissions via manipulating trophic interactions in soil.
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http://dx.doi.org/10.1002/advs.202413227 | DOI Listing |
Appl Environ Microbiol
September 2025
DGIMI, Université de Montpellier, INRAE, Montpellier, France.
is an entomopathogenic bacterium involved in a mutualistic relationship with nematodes. produces a multitude of specialized metabolites by non-ribosomal peptide synthetase (NRPS) pathways to mediate bacterium-nematode-insect interactions. PAX cyclolipopeptides are a family of NRP-type molecules whose ecological role remains poorly understood.
View Article and Find Full Text PDFJ Basic Microbiol
September 2025
Department of Plant Pathology, CCS Haryana Agricultural University, Hisar, Haryana, India.
Cereal cyst nematode (Heterodera avenae) significantly hampers barley production by causing stunted growth and yield losses. This study explored the biocontrol potential of multitrait root endophytic bacteria isolated from H. avenae-infested barley roots to suppress nematode infestation.
View Article and Find Full Text PDFPLoS Pathog
September 2025
Department of Molecular, Cellular and Developmental Biology, University of California, Santa Cruz, California, United States of America.
The discovery of the endosymbiotic bacteria Wolbachia as an obligate symbiont of. filarial nematodes has led to antibiotic-based treatments for filarial diseases. While lab.
View Article and Find Full Text PDFPLoS One
September 2025
Department of Food Science, Ishikawa Prefectural University, Nonoichi, Ishikawa, Japan.
Epidemiological studies in humans have suggested that tomato consumption and the compositional ratios of Prevotella, Megamonas, and Streptococcus in the intestinal microbiota are related to intestinal permeability. In this study, we investigated the causal relationship using Caenorhabditis (C.) elegans.
View Article and Find Full Text PDFFront Microbiol
August 2025
Department of Integrative Biology, Oregon State University, Corvallis, OR, United States.
The facultative-parasitic nematode has been used for many years as a biological control agent targeting slug pests. During the nematode's infection process, the presence of certain bacteria has been suggested to affect the pathogenicity and efficiency of the nematodes in killing slugs, though the potential roles of different bacteria in affecting host-infection by nematodes remain unclear. In this study, we examined three experimental populations cultured with three different bacteria: 1) (EC), 2) a newly isolated sp.
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