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The transcription factor BCL11A is a critical regulator of the switch from fetal hemoglobin (HbF: αγ) to adult hemoglobin (HbA: αβ) during development. BCL11A binds at a cognate recognition site (TGACCA) in the γ-globin gene promoter and represses its expression. DNA-binding is mediated by a triple zinc finger domain, designated ZnF456. Here, we report comprehensive investigation of ZnF456, leveraging X-ray crystallography and NMR to determine the structures in both the presence and absence of DNA. We delve into the dynamics and mode of interaction with DNA. Moreover, we discovered that the last zinc finger of BCL11A (ZnF6) plays a different role compared to ZnF4 and 5, providing a positive entropic contribution to DNA binding and γ-globin gene repression. Comprehending the DNA binding mechanism of BCL11A opens avenues for the strategic, structure-based design of novel therapeutics targeting sickle cell disease and β-thalassemia.
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http://dx.doi.org/10.1016/j.str.2024.09.022 | DOI Listing |
J Health Popul Nutr
August 2025
Preventive Medicine Department, Jiangmen Wuyi Hospital of TCM Affiliated Jiangmen TCM Hospital of Ji'nan University, Jiangmen, China.
Background: Epidemiological studies have suggested that dried fruit intake may be associated with a lower risk of breast cancer (BC), yet the genetic mechanisms underlying this association remain unclear. This study aimed to explore the potential genetic relationship between dried fruit intake and BC susceptibility.
Methods: We conducted a comprehensive genetic analysis using genome-wide association study (GWAS) data for dried fruit intake and BC, focusing on individuals of European ancestry.
Chronic Spontaneous Urticaria (CSU) disrupts patients' physical wellbeing through recurrent wheals that last for up to 24 h and pruritus, and may also contribute to the development and progression of mental health conditions such as depression due to poor control of CSU symptoms. Clinical evidence has shown significant comorbidity between CSU and major depressive disorder (MDD), but our understanding of the underlying molecular mechanisms and how they differ by sex remains limited. In this work, five gene expression datasets were obtained from the Gene Expression Omnibus (GEO), encompassing three for MDD (GSE52790, GSE38206, GSE76826) and two exclusively whole-blood datasets for CSU (GSE167882, GSE72541).
View Article and Find Full Text PDFCurr Pharm Des
July 2025
Institute of Subtropical Agriculture, the Chinese Academy of Sciences, Changsha, China.
Introduction: Impaired intestinal immune function is commonly observed in neonates with intrauterine growth retardation (IUGR), yet its underlying mechanisms and regulatory pathways remain poorly understood. Therefore, we aimed to investigate gene regulatory patterns and microbiota alterations in IUGR piglets.
Methods: Three newborn IUGR piglets and three normal littermates were selected from the same sow and sacrificed at seven days of age.
Proc Natl Acad Sci U S A
July 2025
Department of Hematology, Tongji Hospital, Frontier Science Center for Stem Cell Research, School of Life Sciences and Technology, Tongji University, Shanghai 200092, China.
B-1a cells, a self-renewing B cell subset essential for innate immunity, produce natural IgM antibodies that defend against pathogens, yet mechanisms sustaining their maintenance during aging remain unclear. We report that aging B-1a cells exhibit hallmarks of decline, including DNA damage, apoptosis, and reduced proliferation, with striking sex-specific disparities: aged females retain higher B-1a cell numbers than males, correlating with enhanced glycolysis and chromatin accessibility. Motif analysis of accessible regions identified the transcription factor Bcl11a, which shows elevated chromatin accessibility and expression in aged female B-1a cells but declines in males.
View Article and Find Full Text PDFBiomolecules
May 2025
School of Life Sciences and School of Chemistry, Tiangong University, Tianjin 300387, China.
Testicular orphan receptors TR2 and TR4 serve as central regulators of erythropoiesis, orchestrating the entire continuum of erythroid progenitor cell proliferation, differentiation, and maturation. As core components of the direct repeat erythroid determinant (DRED) complex, they activate erythroid-specific transcriptional programs to dynamically control the spatiotemporal expression of globin genes. These nuclear receptors not only engage in functional interactions with key erythroid transcription factors GATA1 and KLF1 to coregulate erythroid differentiation and maturation but also recruit epigenetic modifier complexes such as DNMT1 and LSD1 to modulate chromatin states dynamically.
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