98%
921
2 minutes
20
DNA topoisomerase 1 (TOP1) plays general roles in DNA replication and transcription by regulating DNA topology in land plants and metazoans. TOP1 is also involved in specific developmental events; however, whether TOP1 plays a conserved developmental role among multicellular organisms is unknown. Here, we investigated the developmental roles of TOP1 in the moss Physcomitrium (Physcomitrella) patens with gene targeting, microscopy, 3D image segmentation and crossing experiments. We discovered that the disruption of TOP1α, but not its paralogue TOP1β, leads to a defect in fertilisation and subsequent sporophyte formation in P. patens. In the top1α mutant, the egg cell was functional for fertilisation, while sperm cells were fewer and infertile with disordered structures. We observed that the nuclei volume of wild-type sperm cells synchronously decreases during antheridium development, indicating chromatin condensation towards the compact sperm head. By contrast, the top1α mutant exhibited attenuated cell divisions and asynchronous and defective contraction of the nuclei of sperm cells throughout spermatogenesis. These results indicate that TOP1α is involved in cell division and chromatin condensation during spermatogenesis in P. patens. Our results suggest that the regulation of DNA topology by TOP1 plays a key role in spermatogenesis in both land plants and metazoans.
Download full-text PDF |
Source |
---|---|
http://dx.doi.org/10.1111/nph.17983 | DOI Listing |
bioRxiv
August 2025
Department of Biochemistry and Molecular Genetics, University of Virginia School of Medicine, Charlottesville VA.
Genomic instability and loss of proteostasis are two of the primary Hallmarks of Aging. Although these hallmarks are well-defined in the literature, the mechanisms that drive genomic instability and loss of proteostasis as cells age are still largely unknown. Using budding yeast replicative lifespan as a model for aging in actively dividing cells, we identified nuclear proteins that were depleted in the earliest stages of aging.
View Article and Find Full Text PDFSci Rep
July 2025
University of Electronic Science and Technology of China, Chengdu, China.
Person search aims to locate all pedestrians from a complete image and identify the target pedestrian, which plays an important role in the field of intelligent video surveillance. However, influence come from factors such as occlusion may cause the miss detection of the pedestrians in the original image and affecting cross-camera person search tasks greatly. Therefore, based on the DINO detection model, a method is proposed for jointly optimizing pedestrian detection and re-identification (DINOPS): a part attention mechanism is introduced to integrate global and local pedestrian features, reduce missed detection and improve the re-identification ability.
View Article and Find Full Text PDFToxicol Lett
July 2025
Department of Respiratory Medicine, Children's Hospital of Soochow University, Suzhou, China. Electronic address:
Allergens, a common trigger of asthma, can lead to increased levels of reactive oxygen species (ROS) and subsequent DNA damage. However, the repair mechanism of DNA damage caused by oxidative stress in allergen-induced asthma is less known. We explored the mechanism by which topoisomerase 1 binding arginine/serine rich protein (TOPORS) regulates small ubiquitin-related modifier 1 (SUMO1) modification of TOP1 to repair DNA damage induced by ovalbumin (OVA).
View Article and Find Full Text PDFbioRxiv
June 2025
Massachusetts Institute of Technology, 77 Massachusetts Ave, Cambridge, 02139, MA, United States.
Structural elucidation using untargeted tandem mass spectrometry (MS/MS) has played a critical role in advancing scientific discovery [1, 2]. However, differentiating molecular fragmentation patterns between isobaric structures remains a prominent challenge in metabolomics [3-10], drug discovery [11-13], and reaction screening [14-17], presenting a significant barrier to the cost-effective and rapid identification of unknown molecular structures. Here, we present a geometric deep learning model, ICEBERG, that simulates collision-induced dissociation in mass spectrometry to generate chemically plausible fragments and their relative intensities with awareness of collision energies and polarities.
View Article and Find Full Text PDFPLoS One
May 2025
School of Engineering, University of Liverpool, Liverpool, United Kingdom.
Background: Food classification is the foundation for developing food vision tasks and plays a key role in the burgeoning field of computational nutrition. Due to the complexity of food requiring fine-grained classification, the Convolutional Neural Networks (CNNs) backbone needs additional structural design, whereas Vision Transformers (ViTs), containing the self-attention module, has increased computational complexity.
Methods: We propose a ResVMamba model and validate its performance on processing complex food dataset.