Publications by authors named "Wen-Bin Yu"

We report the short-term results of indocyanine green (ICG)-guided laparoscopic lymphadenectomy for gastric cancer (GC). The primary outcome is 3-year disease-free survival. In this analysis, we present short-term secondary outcomes focused on the number of lymph nodes (LNs) retrieved and the diagnostic value of fluorescent status for metastatic LNs, excluding long-term outcomes.

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  • Researchers studied a group of orchids called Orchidaceae: Epidendroideae, which has about 60 species found in Southeast Asia, to understand how they became so diverse over time.
  • They used a type of genetic analysis to figure out the family tree of these orchids and found that they began to thrive in different parts of East Asia about 21 million years ago.
  • The study showed that changes in temperature and rainy seasons (monsoons) helped these orchids grow and spread, but their rate of new species appearing slowed down as the climate got cooler.
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  • The study examines around 270 endemic species of Pedicularis in the Himalaya-Hengduan Mountains, focusing on their geographic distribution, elevation ranges, and unique floral features.
  • By analyzing Clade 3's plastid phylogeny alongside environmental data, the researchers explore factors influencing species diversity and identify a key area of diversity from northwest Yunnan to southwest Sichuan.
  • The findings suggest that diversification rates are linked to precipitation and environmental factors, with allopatric speciation playing a significant role, while corolla traits do not significantly affect species diversification.
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Lamiales, comprising over 23,755 species across 24 families, stands as a highly diverse and prolific plant group, playing a significant role in the cultivation of horticultural, ornamental, and medicinal plant varieties. Whole-genome duplication (WGD) and its subsequent post-polyploid diploidization (PPD) process represent the most drastic type of karyotype evolution, injecting significant potential for promoting the diversity of this lineage. However, polyploidization histories, as well as genome and subgenome fractionation following WGD events in Lamiales species, are still not well investigated.

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Dracaena cambodiana Pierre ex Gagn. (Asparagaceae) is the source plant of Dragon's blood and has high ornamental values in gardening. Currently, this species is classified as the second-class state-protected species in the National Key Protected Wild Plants (NKPWP) of China.

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Flueggea virosa (Roxb. ex Willd.) Royle, an evergreen shrub and small tree in the Phyllanthaceae family, holds significant potential in garden landscaping and pharmacological applications.

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Parasitic lifestyle can often relax the constraint on the plastome, leading to gene pseudogenization and loss, and resulting in diverse genomic structures and rampant genome degradation. Although several plastomes of parasitic Cuscuta have  been reported, the evolution of parasitism in the family Convolvulaceae which is linked to structural variations and reduction of plastome has not been well investigated. In this study, we assembled and collected 40 plastid genomes belonging to 23 species representing four subgenera of Cuscuta and ten species of autotrophic Convolvulaceae.

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The insect mitogenome is typically a compact circular molecule with highly conserved gene contents. Nonetheless, mitogenome structural variations have been reported in specific taxa, and gene rearrangements, usually the tRNAs, occur in different lineages. Because synapomorphies of mitogenome organizations can provide information for phylogenetic inferences, comparative analyses of mitogenomes have been given increasing attention.

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Background: Fibroblast growth factor (FGF) 15/19, which is expressed in and secreted from the distal ileum, can regulate hepatic glucose metabolism in an endocrine manner. The levels of both bile acids (BAs) and FGF15/19 are elevated after bariatric surgery. However, it is unclear whether the increase in FGF15/19 is induced by BAs.

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Objective: To evaluate the safety and clinical effect of tubular esophagogastric anastomosis in laparoscopic radical proximal gastrectomy.

Methods: A retrospective analysis was conducted involving 191 patients who underwent laparoscopic radical proximal gastrectomy in the Department of Gastrointestinal Surgery, Qilu Hospital of Shandong University from January 2017 to October 2020. Patients were divided into tubular esophagogastric anastomosis group (TG group) and traditional esophagogastric anastomosis group (EG group) according to the digestive tract reconstruction.

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Premise Of The Research: Plants remain underrepresented among species with sequenced mitochondrial genomes (mitogenomes), due to the difficulty in assembly with short-read technology. Invasive species lag behind crops and other economically important species in this respect, representing a lack of tools for management and land conservation efforts.

Methodology: The mitogenome of , one of the most damaging invasive plant species in North America, was sequenced and analyzed using long-read data, providing a resource for biologists and managers.

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Article Synopsis
  • The study explores how duodenal-jejunal bypass (DJB) surgery may help regulate diabetes by impacting duodenal SIRT1 expression and its relationship with bile acids (BAs).
  • Researchers performed tests on diabetic rats to measure changes in body weight, blood glucose levels, and specific gene expressions related to bile acid signaling after surgery.
  • Results showed that DJB surgery improved glucose tolerance and reduced fasting blood glucose levels in the rats, suggesting a possible mechanism for diabetes control through bile acid interaction with SIRT1.
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We report the complete chloroplast genome (plastome) sequences of (147,087 bp) and (145,726 bp), endemic to southwestern China. Both plastomes have typical quadripartite structures with one large-single copy region, one small-single copy region, and two inverted repeat regions. Both plastome sequences contained 37 tRNA genes and eight rRNA genes, but they differed in the numbers of protein-coding genes: had 76 functional genes and 12 pseudogenes while had 74 functional genes and 13 pseudogenes.

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Morphological approaches often fail to delimit species in recently derived species complexes. This can be exacerbated in historical collections which may have lost key features in specimen preparation and preservation. Here, we examine the complex, endemic to the Mountains of Southwest China.

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(Rosaceae) is an economically important genus with around 30 species. It is widely distributed in tropical and warm temperate regions of Asia, with most of its species in China, Myanmar, and Vietnam. However, is often confused with the smaller genus , and the phylogenetic relationships between the two genera are controversial.

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We aimed to infer ancestral area and historical colonization of in the sky islands of Bioko and Cameroon through dated phylogeny using chloroplast genomes. Specifically, we aim to answer the following questions: (1) What are the phylogenetic relationships among Bioko Island and Cameroon populations? (2) Are the older populations found in the older sky islands? We assembled novel plastomes from 20 individuals of from 5 mountain systems. The plastome data were explored with phylogenetic analyses using Maximum Likelihood and Bayesian Inference.

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and , two new species from the karst region of southwestern China, and , a new species from montane region in Yunnan, are described and illustrated. is easily distinguished from its relatives by having abaxially purple leave with purple reticulate veins prominent adaxially, a lip auriculate at base, and falcate-lanceolate pollinia. is closely related to and but differs from them by having an ovate to broadly ovate leaf, purple lip and apex connate along the margins.

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Four new species of Orchidaceae from China, , , , and , together with a new country record, , are described and illustrated based on morphological and/or phylogenetic analyses. is closely related to but differs from it by having the dorsal sepal ovate-orbicular and lip mid-lobe distinctly shorter than lateral lobes. is close to but is distinguished from it by having several fascicled and straight, root-like tubers (vs.

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Article Synopsis
  • - This study greatly expands the understanding of flowering plants' evolutionary relationships by assembling the largest dataset of plastomes, combining data from 4,792 plastomes across 4,660 species and 2,024 genera.
  • - The resulting phylogenetic tree provides strong support for many previously unclear relationships among plant families and orders, particularly within core eudicots, allowing a better understanding of their evolutionary history.
  • - Despite significant findings, some relationships, especially among the major clades of Mesangiospermae, remain unresolved, indicating further research is needed due to the complexity of early plant evolution.
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We report complete chloroplast genome (plastome) sequences of (150,105 bp) and (150,998 bp). Both plastomes had the typical quadripartite structure, with large single-copy (LSC) and small single-copy (SSC) regions separated by two inverted repeat (IR) regions. Both plastomes have lost the and CDS genes, and had like, like, and like pseudogenes.

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The plastid genome (plastome) is highly conserved in both gene order and content and has a lower mutation rate than the nuclear genome. However, the plastome is more variable in heterotrophic plants. To date, most such studies have investigated just a few species or only holoheterotrophic groups, and few have examined plastome evolution in recently derived lineages at an early stage of transition from autotrophy to heterotrophy.

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  • Ficus (figs) and their wasp pollinators have a long-standing mutualistic relationship that spans around 75 million years, making them an interesting subject for studying co-evolution.
  • Researchers sequenced whole genomes from 15 Ficus species and found evidence of hybridization throughout their evolutionary journey.
  • Significant discrepancies were observed between the phylogenies of the figs and their pollinator wasps, suggesting that frequent host-switching by the wasps and fig hybridization events play a key role in their coevolution and the resulting diversity within this ecological partnership.
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We reported the first complete plastid genome of (Malpighiaceae) in this study. The complete plastome of is 160,453 bp in length with a base composition of A (31.4%), G (18.

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