Publications by authors named "Caixin Yang"

Chitin synthase serves as a promising target for developing eco-friendly insecticides. Nevertheless, the lack of structural insights into insect chitin synthase has impeded the rational design of specific inhibitors. Herein, we utilized AlphaFold to predict the structure of Chs1.

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Two Gram-negative, oxidase-positive, catalase-positive, non-spore-forming, motile, short-rod strains (G13 and G34) were isolated from coal block samples. Phylogenetic analyses based on 16S rRNA genes and 718 core genes indicated that both strains belonged to the genus , with the closest relative being AIMA4 as their closest relative. Average nucleotide identity and digital DNA-DNA hybridization values were 79.

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Four Gram-stain-positive, facultative anaerobic, yellow-pigmented and short rod-shaped strains, designated zg-Y625, zg-Y843, zg-Y1090 and zg-Y1211, were isolated from the intestinal contents of in Qinghai Province, PR China. Strains zg-Y625 and zg-Y1090 showed the highest 16S rRNA gene sequence similarities of 99.7% and 99.

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Four novel, Gram-stain-positive, catalase-positive, oxidase-negative, aerobic and non-motile strains, designated MJ206, MJ278, MJ170 and MJ173, were isolated from the faeces of in the Qinghai-Tibet Plateau of China. A comparative analysis of 16S rRNA gene sequences revealed that strain pairs MJ206 and MJ278, as well as MJ170 and MJ173, belong to the genus . Strain pair MJ206/MJ278 is most closely related to '' ZLJ0423 (98.

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Article Synopsis
  • Two new bacteria, zg-86 and zg-70, were discovered in the respiratory tracts of marmots in China, classified within the Streptococcus genus after genetic analysis.
  • Both strains have low genetic similarity to known species, indicating they may represent a novel species, suggested to be called Streptococcus zhangguiae.
  • The bacteria thrive under specific conditions (37 °C, pH 7.0) and show potential pathogenic traits based on comparative genomic studies.
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Four anaerobic, Gram-stain-positive, non-motile, non-sporulating rod-shaped bacterial strains (R7, R21, R22 and R25) were isolated from the intestinal contents of plateau pika () collected from the Qinghai-Tibet Plateau, PR China. The four isolates grew at between 25 and 42 °C (optimally at 35-37 °C), and with 0.3-3.

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  • Four bacterial strains (dk4302, dk4209, xlx-73, xlx-183) were isolated from Tibetan gazelle and red swamp crawfish in China, characterized as Gram-negative, rod-shaped, and aerobic, with varying growth conditions related to temperature and salinity.
  • Phylogenetic analysis identified two distinct clusters among the strains, with dk4302 and dk4209 closely related, while xlx-73 and xlx-183 were associated with M-SX103.
  • Based on extensive research, two new species were proposed: sp. nov. for dk4302 and sp. nov. for xlx-73, emphasizing their uniqueness within their genus.
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  • - Two new bacterial strains, HM61/HM23 and S-34/S-58, were discovered from soil and Tibetan antelope feces in the Qinghai-Tibet Plateau, characterized as aerobic, Gram-positive, and non-motile short rods.
  • - Phylogenetic analysis based on 16S rRNA and core genomic genes revealed that these strains belong to distinct species within the same genus, showing high sequence similarity to known strains THG T63 and MMS20-HV4-12.
  • - The study's findings led to the proposal of two novel species, named sp. nov. (for HM61) and sp. nov. (for S-34), with detailed descriptions of their chemotaxonomic
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Unlabelled: is the dominant species of the genus in the gut, which is genomically heterogeneous and difficult to isolate; hence, scarce research was carried out for this species. This study aimed to investigate the effect of on hyperglycemia. Thirty-nine strains were isolated from healthy individuals, and three strains (HF2123, HF1478, and HF2130) that had the highest glucose consumption were selected to evaluate the effects of supplementation on hyperglycemia.

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Six Gram-stain-positive, facultative anaerobic, nonmotile and rod-shaped strains, designated zg-Y50, zg-Y1362, zg-Y1379, zg-Y869, zg-629 and zg-Y636, were isolated from the intestinal contents of in Qinghai Province, PR China. Strains zg-Y50, zg-Y1379 and zg-629 exhibited the highest 16S rRNA gene sequence similarities of 99.2, 98.

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Two Gram-stain-negative, non-spore-forming, rod-shaped, and obligately aerobic bacteria, designated strains CX-624 and cx-311, were isolated from soil samples in Qinghai Province, China. The two strains grew best at 28 °C on the plate with Tryptone soya agar (TSA). Cells formed circular, convex, translucent, smooth, and orange colonies with approximately 1.

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Four Gram-stain-negative, oxidase-positive, non-motile, cocci-shaped bacteria strains (ZJ106, ZJ104, ZJ785 and ZJ930) were isolated from marmot respiratory tracts. Phylogenetic analyses based on 16S rRNA genes, 53 ribosomal protein sequences and 441 core genes supported that all four strains belonged to the genus with close relatives 10022 and ATCC 51483. Average nucleotide identity (ANI) and digital DNA-DNA hybridization (dDDH) values were below the species-level thresholds (95-96 % for ANI, and 70 % for dDDH).

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Introduction: Ticks and fleas, as blood-sucking arthropods, carry and transmit various zoonotic diseases. In the natural plague foci of China, monitoring of has been continuously conducted in and other host animals, whereas other pathogens carried by vectors are rarely concerned in the Qinghai-Tibet Plateau.

Methods: In this study, we investigated the microbiota of ticks and fleas sampling from in the Plateau, China by metataxonomics combined with metagenomic methods.

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Six facultative anaerobic, Gram-stain-positive, oxidase-negative, rod-shaped bacteria (strains zg-B89, zg-B12, zg-Y338, zg-Y138, zg-Y908 and zg-Y766), were isolated from the intestinal contents of in Qinghai Province, PR China. The 16S rRNA gene sequence analysis showed that zg-B89 showed highest similarity to NBRC 101100 (99.5 %), zg-Y338 to DSM 20118 (98.

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Six aerobic or facultative anaerobic, motile, Gram-stain-positive, catalase-positive and oxidase-negative strains (zg-Y453, zg-Y324, zg-Y462, zg-Y411, zg-Y809 and zg-Y786) were isolated from different faecal samples of from the Qinghai-Tibet Plateau. Pale yellow, round, raised and moist colonies appeared 48 h after incubation at 28 °C on brain-heart infusion plates supplemented with 5 % defibrinated sheep blood. According to the 16S rRNA gene sequence alignment, two strain pairs (zg-Y453/zg-Y324 and zg-Y462/zg-Y411) shared the highest similarities to (99.

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Article Synopsis
  • Emerging zoonoses from wildlife, like the plateau pika virus (PPV), pose significant threats to human health, especially in unique ecosystems like the Qinghai-Tibet Plateau.
  • Researchers identified PPV through virome analysis and found that it can replicate in various mammalian cells, causing serious health issues in animal models, including trembling and sudden death.
  • PPV is distinct from other known mammarenaviruses, with an estimated divergence time of 77-88 million years, indicating its long-standing presence before other similar viruses.
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Six novel bacterial strains, designated CY22, CY357, LJ419, LJ53, CY399 and CY107 were isolated from soil samples collected from the Qinghai-Tibetan Plateau, PR China. Cells were aerobic, rod-shaped, yellow-pigmented, catalase- and oxidase-positive, Gram-stain-negative, non-motile and non-spore-forming. All strains were psychrotolerant and could grow at 0 °C.

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Four Gram-stain-positive, facultatively anaerobic, non-motile, non-spore-forming and rod-shaped bacteria (lx-72, lx-45, ZJ784 and ZJ955) were isolated from the respiratory tract or faeces of marmot () from the Qinghai-Tibet Plateau in China. Analysis of the 16S rRNA gene sequences showed that all strains belong to the genus and are more related to CCUG 64069 (95.1-97.

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Nocardia is emerging as a serious and easily neglected pathogen in clinical practice with multidrug resistance that extends the treatment period for months or even years. This has led to the investigation of a vaccine approach to prevent Nocardia infections. However, studies on the protective proteins of Nocardia have not yet been carried out.

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Six Gram-stain-positive, aerobic or facultative anaerobic, catalase-positive, urease- and oxidase-negative, rod-shaped bacteria (zg-ZUI157/zg-ZUI40, zg-ZUI222/zg-ZUI199 and zg-ZUI188/ zg-ZUI168) were characterized by a polyphasic approach. Optimal growth of the six strains was observed at pH 7.0 and 28 °C.

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Methicillin-resistant (MRSA) poses a severe threat to public health and safety. The discovery and development of novel anti-MRSA drugs with a new mode of action are a challenge. In this study, a class of novel aryloxyethyl propiolates and their homologues as anti-MRSA agents have been designed and synthesized based on phenoxyethanol, of which compound showed high inhibitory activity against MRSA with an MIC of 0.

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Six Gram-stain-positive, aerobic and irregular-rod-shaped actinobacteria (ZJ1313, ZJ1307, MC1495, Y192, 603 and X2025) were isolated from the Qinghai-Tibet Plateau of China and were characterized using a polyphasic taxonomic method. Phylogenetic analysis based on 16S rRNA gene sequences indicated that the six new strains formed three distinct clusters within the genus , and strains ZJ1313 and ZJ1307 were most closely related to JCM 31492 (16S rRNA gene sequence similarity, 98.0 %), MC1495 and Y192 to 78 (98.

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Two Gram-stain-positive, catalase-negative, non-spore-forming, cocci-shaped strains (dk850 and JY899) were isolated from the feces of Equus kiang in the Qinghai-Tibet Plateau of China. 16S rRNA gene sequence-based phylogenetic analyses showed that strains dk850 and JY899 belong to the genus Flaviflexus, closest to F. salsibiostraticola KCTC 33148, F.

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Four bacterial strains (LJ126/S18 and Z-34/S20) recovered from faecal samples of Tibetan antelopes on the Qinghai-Tibet Plateau of China were analysed using a polyphasic approach. All four isolates were aerobic, short rod-shaped, non-motile, Gram-stain-positive, acid-fast and fast-growing. Phylogenetic analyses based upon 16S rRNA and whole-genome sequences showed that the two pair of strains formed two distinct branches within the evolutionary radiation of the genus .

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Six novel facultatively anaerobic, Gram-stain-positive, rod-shaped, non-haemolytic bacteria (zg-320/zg-336, zg-917/zg-910 and zg-913/zg-915) isolated from animal tissues and human faeces were found to belong to the genus based on the phylogenetic analyses of 16S rRNA gene and 262 core genes set. Based on the greatest degree of 16S rRNA similarity, zg-320/zg-336 had the highest 16S rRNA gene similarity to DSM 44353 (97.51 %), zg-917/zg-910 to DSM 44184 (98.

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