9,482 results match your criteria: "Institute of Bioorganic Chemistry[Affiliation]"
Acta Crystallogr E Crystallogr Commun
September 2025
Institute of Bioorganic Chemistry, Academy of Sciences of Uzbekistan, 100125, M., Ulugbek Str 83, Tashkent, Uzbekistan.
The title complex, [Ca(NO)(CHNO)(HO)], crystallizes with an eight-coordinate Ca ion in a distorted trigonal-dodeca-hedral coordination environment. The metal ion is coordinated to two nicotinamide ligands their carbonyl O atoms, two bidentate nitrate anions and two water mol-ecules. The nicotinamide ligands adopt a nearly geometry, while the nitrate anions and aqua ligands are arranged in a pseudo- fashion.
View Article and Find Full Text PDFPestic Biochem Physiol
November 2025
Department of Chemistry, College of Arts and Sciences, Northeast Agricultural University, Harbin 150030, China; Key Laboratory of Agricultural Functional Molecule Design and Utilization of Heilongjiang Province, Northeast Agricultural University, Harbin 150030, China. Electronic address:
Pigment biosynthesis serves as a fundamental physiological process vital for weeds survival. Disruption of this pathway leads to the depletion of critical pigments, ultimately resulting in weeds death. Consequently, pigment biosynthesis has become a valuable target in modern herbicide development.
View Article and Find Full Text PDFJ Neurosci Methods
September 2025
Institute of Higher Nervous Activity and Neurophysiology, Russian Academy of Sciences, Moscow, Russia. Electronic address:
Background: Most researchers rely on popular promoters like the synthetic CAG promoter or human synapsin promoter to transduce various brain neurons. However, their effectiveness in transducing forebrain cholinergic neurons remains unclear.
New Method: We compared efficacy of transduction of cholinergic neurons and parvalbumin-positive neurons in the medial septal area of rats and mice by adeno-associated viruses (AAVs) carrying the green fluorescent protein (GFP) marker gene under three distinct promoters-CAG, synapsin, and the mouse choline acetyltransferase (CHAT) promoter.
ACS Sens
September 2025
Faculty of Biology, Lomonosov Moscow State University, Moscow, Russian Federation 119991.
Fluorogen-activating proteins are powerful molecular tools for microscopy, including functional imaging. These proteins serve as an alternative to GFP-like proteins, as they do not require oxygen for chromophore maturation. However, the restricted selectivity of proteins to chromophores, combined with the limited number of spectral channels of conventional fluorescent microscopes, hinders the development of multicolor synthetic dyes.
View Article and Find Full Text PDFMol Oncol
September 2025
Department of Internal Medicine - Hematology and Oncology, University Hospital Brno and Faculty of Medicine, Masaryk University, Brno, Czech Republic.
Retroelements in the human genome are silenced via multiple mechanisms, including DNA methylation, to prevent their potential mutagenic effect. Retroelement activity, demonstrated by their expression and somatic retrotransposition events, was shown to be deregulated in multiple tumors but not yet in leukemia. We hypothesized that treatment with hypomethylating agents, commonly used in myelodysplastic syndromes and acute myeloid leukemia, could lead to increased retroelement activity and somatic retrotranspositions, thus contributing to disease progression.
View Article and Find Full Text PDFChem Sci
August 2025
Department of Chemistry and Centre for Sustainable Chemistry, Ghent University Ghent Belgium
Two distinct synthetic pathways are disclosed that lead to new gold-selenolato complexes, stabilized by N-heterocyclic carbenes (NHCs). The weak base route can provide facile access to phenylselenolate complexes of gold, using both NHC and phopshine ligands. In addition, the pathway based on the carbometallation of elemental selenium enables the construction of a more diverse library of products, based on substituted aryl-selenide fragments whose selenol congeners are not commercially available.
View Article and Find Full Text PDFFront Immunol
September 2025
Dmitry Rogachev National Medical Center of Pediatric Hematology, Oncology, and Immunology, Moscow, Russia.
Central nervous system (CNS) tumors are the second most common type of cancer in children and remain the leading cause of mortality in pediatric oncology. For patients with high-risk CNS tumors, standard treatments often prove ineffective, with survival rates being less than 10%. Hence, there is an urgent need to develop alternative treatment strategies for this patient population.
View Article and Find Full Text PDFFront Immunol
September 2025
Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Science, Moscow, Russia.
Gliomas are aggressive brain tumors of glial origin accounting for about 80% of the central nervous system (CNS) malignancies. Glioma cells are known to form a highly immunosuppressive tumor microenvironment (TME) capable of inhibiting T cell activation and protecting tumors from elimination by the immune system. One of the predominant immune inhibitory mechanisms in the TME are immune checkpoints: a complex system of membrane-bound ligands on tumor and immune cells that interact with surface receptors on T lymphocytes and affect their activation and cytotoxicity.
View Article and Find Full Text PDFNat Methods
September 2025
School of Biochemistry and Cell Biology, University College Cork, Cork, Ireland.
Biochemistry (Mosc)
August 2025
Endocrinology Research Center, Moscow, 117036, Russia.
Endocrine disorders represent a serious public health problem and frequently can be caused by genetic factors or their combination with environmental and lifestyle factors. Assessment of relevant genetic factors is important to estimate the risk of endocrine pathologies in an individual before their manifestation. Identification of genetic variations in proteins of the major histocompatibility complex is important with regard to the autoimmune nature of many endocrine pathologies, including type 1 diabetes.
View Article and Find Full Text PDFAdv Exp Med Biol
August 2025
Department of Rare Diseases, Polish Academy of Sciences, Institute of Bioorganic Chemistry, Poznan, Poland.
Circular RNAs (circRNAs) constitute a class of covalently closed, single-stranded RNA molecules that form a continuous loop structure, setting them apart from linear RNA molecules. These circular entities arise through a distinct biogenetic process termed "backsplicing," which involves the covalent bonding of the 5' site of an upstream exon with the 3' site of the same or a downstream exon during pre-messenger RNA (pre-mRNA) splicing. Such a direct backsplicing model exists along with the exon- and lariat-skipping models of circRNA generation, giving rise to three major types of circRNAs, i.
View Article and Find Full Text PDFViruses
August 2025
Pirogov Russian National Research Medical University, Ostrovityanova 1, 117997 Moscow, Russia.
Antibiotic-resistant presents a critical global health challenge, particularly in hospital-acquired infections. Bacteriophages offer a promising therapeutic avenue due to their ability to target and lyse resistant strains. This study characterizes phage Banzai, a newly isolated (family ) with lytic activity against multiple isolates, including multidrug-resistant strains.
View Article and Find Full Text PDFInt J Mol Sci
August 2025
Institute of Gene Biology Russian Academy of Sciences, 119334 Moscow, Russia.
Proximity biotinylation, which utilizes various biotin ligating enzymes (BioID, TurboID, etc.), is widely used as a powerful tool for identifying novel protein-protein interactions. However, this method has a significant limitation: the use of streptavidin on beads for enriching biotinylated proteins often results in a high background of peptides from streptavidin itself, which interferes with identification by peptide mass fingerprinting.
View Article and Find Full Text PDFβ-adrenoreceptor (ADRB) ligands are actively used in the therapy of bronchopulmonary and cardiovascular diseases. When using these drugs, it is important to assess changes in ADRB content in different tissues. In most cases, the direct measurement of ADRB content in lung and heart cells is not possible.
View Article and Find Full Text PDFNucleic Acids Res
August 2025
Institute of Bioorganic Chemistry, Polish Academy of Sciences, 61-704 Poznan, Poland.
Interest in the genetic variation of noncoding genomic elements, including microRNAs (miRNAs), is growing, and several mutations in miRNA genes implicated in human diseases, including cancer, have already been detected. However, the lack of dedicated analytical tools severely hampers progress in this area. In this study, we developed the first whole-miRNome sequencing (WMS) platform, which enables the targeted sequencing of all human miRNA genes (n ∼2000) and 28 miRNA biogenesis genes.
View Article and Find Full Text PDFProtein Sci
September 2025
Institute of Bioorganic Chemistry & Bioeconomy Science Center (BioSC), Heinrich Heine University Düsseldorf in Forschungszentrum Jülich, Jülich, Germany.
The pyrroloindole (hexahydropyrrolo[2,3-b]indole, HPI) structural motif is present in a wide range of natural products with various biological activities, yet its chemical synthesis poses a challenge, particularly regarding methylation at the indole C3 position. In nature, S-adenosyl methionine (SAM)-dependent methyltransferases efficiently catalyze this reaction with high stereoselectivity. This study presents the investigation and rational re-design of a potential methyltransferase, termed SeMT, from the actinomycete Saccharopolyspora erythraea.
View Article and Find Full Text PDFBull Exp Biol Med
August 2025
Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Moscow, Russia.
In this study, an affinity matrix based on recombinant human angiotensin-converting enzyme 2 (ACE2) immobilized on a porous polymeric substrate was developed and characterized. The matrix efficiently binds viral particles pseudotyped with the SARS-CoV-2 spike protein. These findings highlight the prospects for creating novel affinity matrices for extracorporeal hemoperfusion aimed at reducing viral load in patients with high viremia and severe COVID-19.
View Article and Find Full Text PDFFront Immunol
August 2025
Laboratory for Immunogenetics, Central Research Tuberculosis Institute, Moscow, Russia.
Previously we have shown that -congenic recombinant mice of the B6.I-9.3 ( ) strain are significantly more susceptible to tuberculosis (TB) infection compared to their C57BL/6 (B6, ) ancestors.
View Article and Find Full Text PDFMol Biol (Mosk)
August 2025
Elyakov Pacific Institute of Bioorganic Chemistry, Far East Branch, Russian Academy of Sciences, Vladivostok, 690022 Russia.
In the modern-day world, antibiotic resistance is one of the most serious threats to both human health and food security. Finding new ways to prevent and overcome the formation of pathogen resistance to antibiotics is an extremely important and urgent task in modern medical science. All bacteria, except myco-plasmas, have cell walls in which various enzymes, receptors, transporters, channels, and antigens are located.
View Article and Find Full Text PDFBackground: Tick-borne encephalitis (TBE) is a significant public health challenge in Russia. Vaccination is one of the most effective measures to control TBE. The aim of our study was to assess the state of anti-TBE virus population immunity, including artificial post-vaccine and natural post-infection immunity, in the context of characteristics of the epidemic process in Russia.
View Article and Find Full Text PDFFew genetically encoded systems based on aptamer-dye pairs meet all the requirements of bioimaging in terms of brightness, contrast, ., thus necessitating their optimization. Here, we report a new biotin-free fluorogenic ligand that demonstrates increased selectivity for Mango II over other DNA/RNA structures in tube and brightness in complex with genetically encoded aptamer-labeled RNA in live cells compared to the known dye.
View Article and Find Full Text PDFJ Transl Med
August 2025
Faculty of Biology, Lomonosov Moscow State University, Moscow, 119234, Russia.
Background: Anti-angiogenic therapy is a clinically validated method for cancer treatment. It was previously revealed that concurrent targeting of angiogenic and death receptor signaling pathways by a multivalent DR5-specific cytokine TRAIL variant DR5-B genetically fused with the effector peptides, SRH-DR5-B-iRGD, enhances solid tumor suppression and prolongs survival. The SRH peptide is aimed at blocking the tumor neoangiogenesis by preventing activation of the VEGFR2 receptor, while the iRGD peptide interferes with the activation of integrin αβ, and enhances the tumor penetration.
View Article and Find Full Text PDFChem Biodivers
August 2025
Department of Pharmaceutical Chemistry, School of Pharmaceutical Sciences, Shoolini University, Solan, Himachal Pradesh, India.
Leaves of Fagopyrum esculentum Moench were selected for their rich content of phytochemicals, offering potential biological activities. The aqueous residual fraction (AF) exhibited higher extraction yield (17.5%) compared with the other fractions.
View Article and Find Full Text PDFBiochim Biophys Acta Biomembr
August 2025
Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, 16/10 Miklukho-Maklaya St., Moscow 117997, Russian Federation; Research Institute for Systems Biology and Medicine, 18 Nauchny Proezd St., Moscow 117246, Russian Federation; National Research University Higher Scho
The coronavirus spike protein, the key entity effectuating membrane fusion, cannot exist without membrane-active fragments. In addition to fusion peptides, among such domains are HR1 and HR2. Crucial to the spike's refolding and membrane fusion, they are believed to both interact with each other and bind to the membranes that are merged.
View Article and Find Full Text PDFChemMedChem
August 2025
Institute of Bioorganic Chemistry, Polish Academy of Sciences, Noskowskiego 12/14, 61-704, Poznan, Poland.
Bifunctional antisense oligonucleotides (BASOs) are splice-switching molecular tools composed of two, functional parts, that is, antisense part that hybridizes to target pre-messenger RNA fragment and regulatory part that recruits splicing factors to that localization. The aim is to verify the influence of variously modified nucleotides on alternative splicing regulation of the pyruvate kinase M1/2 gene and the anticancer potential of BASOs. The effect of modified BASOs on the phenotype of cancer cells is evaluated by real-time measurement of cell proliferation and motility.
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