26,168 results match your criteria: "Department of Bacteriology; Jikei Center for Biofilm Science and Technology.[Affiliation]"

Background And Aim: is a multidrug-resistant (MDR) zoonotic pathogen increasingly implicated in infections in both humans and animals, including avian species. Raptors, particularly peregrine falcons, are vulnerable due to their exposure to diverse environments and intensive management practices. This study aimed to identify isolates from peregrine falcons in Saudi Arabia and to characterize their genomic features, phylogenetic relationships, and antimicrobial resistance (AMR) profiles using whole-genome sequencing (WGS).

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The origin and phylogenetic distribution of symbiotic associations between nodulating angiosperms and nitrogen-fixing bacteria have long intrigued biologists. Recent comparative evolutionary analyses have yielded alternative hypotheses: a multistep pathway of independent gains and losses of root nodule symbiosis vs. a single gain followed by numerous losses.

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Objectives: Describe the clinical evolution of a person with recurrent gonococcal cervicitis despite appropriate treatment and lack of reinfection.

Methods: We used the tolerance detection test to confirm that all three culture-positive gonococcal isolates were tolerant to ceftriaxone.

Results: Over a period of 6 months, a transgender man with gonococcal cervicitis experienced eight episodes of treatment failure despite receiving ceftriaxone 1 g intramuscularly on each occasion.

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Background: Metabolic dysfunction-associated steatotic liver disease (MASLD) is the leading cause of chronic liver disease globally, with rising prevalence linked to metabolic syndrome (MetS). Excessive liver fat accumulation (steatosis) worsens disease progression and MASLD prognosis. Moreover, gut microbiota dysbiosis might promote steatosis, accelerating the disease progression to severe stages.

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Pyrazinamide (PZA) plays a crucial role in the treatment of both active and latent tuberculosis, particularly in regimens designed to treat drug-resistant TB. However, diagnosing resistance to PZA poses challenges for managing TB, highlighting the need for accurate detection methods. This study aims to address the challenges in detecting PZA resistance by modifying the standard MGIT960 PZA drug susceptibility testing method by optimizing the inoculum dilution.

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B cell dysregulation during acute COVID-19 is transient.

Immunol Lett

September 2025

Department of Bacteriology and Immunology, Faculty of Medicine, University of Helsinki, Helsinki, Finland; Translational Immunology Research Program, Faculty of Medicine, University of Helsinki, Helsinki, Finland; HUS Diagnostic Center, Clinical Microbiology, Helsinki University Hospital, Helsinki,

Background: COVID-19 is still a significant health concern worldwide. B cell responses to COVID-19 have been extensively studied in acute severe disease, but less so during extended follow-up or mild disease. Persisting immunological changes together with herpesvirus reactivations during acute COVID-19 have been suggested as contributing factors for post-acute sequelae of COVID-19 (PASC).

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We report two cases of Elizabethkingia-related infective endocarditis, highlighting key risk factors such as prosthetic valve replacement. These cases underscore the need to consider endocarditis in the setting of persistent or recurrent bacteremia. Diagnosis proved challenging and required multiple imaging modalities, with positron emission tomography (PET) scan providing critical value when echocardiography was non-contributory.

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Autophagy and Bacterial infections.

Autophagy Rep

September 2025

Department of Cell Biology, School of Medicine of Ribeirão Preto, University of São Paulo, São Paulo, Brazil.

Autophagy is an evolutionarily conserved cellular process that is prominent during bacterial infections. In this review article, we discuss how direct pathogen clearance via xenophagy and regulation of inflammatory products represent dual functions of autophagy that coordinate an effective antimicrobial response. We detail the molecular mechanisms of xenophagy, including signals that indicate the presence of an intracellular pathogen and autophagy receptor-mediated cargo targeting, while highlighting pathogen counterstrategies, such as bacterial effector proteins that inhibit autophagy initiation or exploit autophagic membranes for replication.

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Gut mucin fucosylation dictates the entry of botulinum toxin complexes.

bioRxiv

August 2025

Department of Bacteriology, Graduate School of Medical Sciences, Kanazawa University, Ishikawa 920-8640, Japan.

Botulinum toxins (BoNTs) are the most potent known bacterial toxins. The BoNT complex from B-Okra (large progenitor toxin complex (L-PTC)/B, hyper-oral-toxic) exerts at least 80-fold higher oral toxicity in mice compared with that from serotype A1 (L-PTC/A, non-hyper-oral-toxic). Here, we showed that L-PTC/B was predominantly absorbed through enterocytes, whereas L-PTC/A targeted intestinal microfold cells.

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The production of striped catfish (Pangasianodon hypothalamus) has increased worldwide; recently, it was farmed with Nile tilapia in polyculture farms. Polyculture systems and water temperature (25℃ and 33℃) could affect Edwardsiella tarda infection, antibiotic efficacy, and residues. Moribund fishes were collected from three Farms 1-3: Farm 1 (monoculture, Nile tilapia), Farm 2 (monoculture, striped catfish), and Farm 3 (polyculture).

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Escherichia coli synthesizes curli amyloid fibers extracellularly during biofilm formation and host colonization. The proteostasis network regulates the major curli subunit, CsgA, to prevent intracellular amyloid aggregation, yet the degradation mechanism remains elusive. Here, through a comprehensive investigation employing genetically engineered E.

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Inflammatory bowel disease (IBD) is a chronic condition that leads to inflammation and damage to the gastrointestinal tract. Since dysregulation of the immune system is one of the triggers for IBD, taking probiotics as an immunomodulator in the gut could help control inflammation and IBD by influencing signaling pathways. The present research applied in vitro models to explore the effectiveness of our native probiotic Lactobacillus spp.

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Probiotics and paraprobiotics have the potential to alleviate kidney inflammation by modulating colitis and influencing the autophagy pathway. This study aimed to evaluate their effects on autophagy pathway in kidney inflammation following colitis. Colitis was induced in mice using dextran sodium sulfate (DSS) to simulate gut inflammation.

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A Single Amino Acid in PBP1a Drives High-Level Penicillin and Amoxicillin Resistance in Streptococcus suis.

Int J Antimicrob Agents

August 2025

MOE Joint International Research Laboratory of Animal Health and Food Safety, College of Veterinary Medicine, Nanjing Agricultural University, Nanjing 210014, China;; Key Lab of Animal Bacteriology, Ministry of Agriculture and Rural Affairs, Nanjing 210014, China;; WOAH Reference Lab for Swine Strep

Streptococcus suis is an important zoonotic pathogen that causes severe diseases in both humans and pigs, with β-lactam antibiotics serving as the primary treatment. However, resistance to penicillin and amoxicillin has been steadily increasing, and the mechanisms underlying their resistance remain poorly understood. In this study, we analyzed 534 S.

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We describe a case of acute cholangitis with bacteremia caused by non-O1 and non-O139 (NOVC) in a 76-year-old man following acute gastroenteritis. The strain, isolated from blood cultures, was identified as serogroup O120. It lacked the cholera toxin gene, but it harbored multiple virulence genes, including , , , and .

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Hibernation is a seasonal survival strategy employed by certain mammals that, through torpor use, reduces overall energy expenditure and permits long-term fasting. Although fasting solves the challenge of winter food scarcity, it also removes dietary carbon, a critical biomolecular building block. Here, we demonstrate a process of urea carbon salvage (UCS) in hibernating 13-lined ground squirrels, whereby urea carbon is reclaimed through gut microbial ureolysis and used in reductive acetogenesis to produce acetate, a short-chain fatty acid (SCFA) of major value to the host and its gut microbiota.

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Opsins are highly abundant retinal proteins in the membranes of photoheterotrophic bacteria. However, some microbial genomes encode an but lack the gene for the final enzyme in retinal synthesis. To account for this paradox, we hypothesized that bacterial opsins play a role in membrane structure and/or biogenesis independent from their potential for light-driven signaling or proton pumping.

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Rhizobacteria and kinetin: a synergistic solution for enhanced maize drought tolerance and seed quality.

Physiol Mol Biol Plants

July 2025

Soil Bacteriology Section, Agricultural Biotechnology Research Institute, Ayub Agricultural Research Institute, Faisalabad, Pakistan.

Unlabelled: Drought stress substantially threatens global food security. To cope with this, a field-based trial was performed to examine the influence of PGPRs/microbial consortia & ) and kinetin on the maize under full irrigation and 50% drought. The results of biochemical features of bacteria revealed positive for phosphorus, and zinc solubilization with great capacity to battle stress circumstances owing (ACC deaminase, Indole 3 Acetic acid IAA, and siderophore) production.

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Antibiotic-resistant Acinetobacter baumannii can be killed by a combination of bacteriophages and complement.

Med Microbiol Immunol

September 2025

Translational Immunology Research Program, Department of Bacteriology and Immunology, Faculty of Medicine, University of Helsinki, Helsinki, Finland.

Infections caused by multidrug-resistant Acinetobacter baumannii are an emerging global health threat. Although phages have shown promising results in treating bacterial infections, the mechanisms of the combined effect of phages and innate immunity on clearing A. baumannii remain unclear.

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Background: To date, relationships between pre-covering endometrial swab cytology and bacteriology and fertility outcomes in Thoroughbred broodmares in the United Kingdom are unknown and could aid clinical decision making.

Objectives: To investigate associations between cytology and bacteriology findings from the last endometrial swab taken in the breeding season (15 February to 15 July) and live-foal rates (predicted mean probability of producing a live foal) in UK Thoroughbred broodmares.

Study Design: Retrospective cohort study.

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The potency of diphtheria toxoid is determined by titrating neutralizing antibody levels in immunized mice using the Vero cell assay. The WHO manual recommends titration by determining the cytotoxic endpoint through measuring cell metabolism and observing cell morphology under a microscope, which has been conducted in our laboratory; however, the former is time-consuming and the latter subjective. To address these limitations, we have developed a novel endpoint determination method based on cell image analysis.

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Aspergillus fumigatus causes fatal infections in immunocompromised individuals, with the increasing number of azole-resistant strains leading to high mortality rates. This study aimed to develop a novel in vitro model using electrical impedance to continuously evaluate interactions between A. fumigatus and human cells and antifungal agent efficacy.

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An updated view of metabolic handoffs in microbiomes.

Trends Microbiol

August 2025

Department of Bacteriology, University of Wisconsin-Madison, Madison, WI, USA; Department of Integrative Biology, University of Wisconsin-Madison, Madison, WI, USA; Department of Data Science and AI, Wadhwani School of Data Science and AI, Indian Institute of Technology Madras, Chennai, Tamil Nadu,

From the human gut to the deep ocean, diverse microbial communities underpin essential ecosystem processes. Limited understanding of the dynamics and interactions that shape these communities, however, constrains efforts to culture, investigate, and harness their potential. Further, these knowledge gaps restrict the ability to predict microbial responses to broader biodiversity declines and global change.

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BACKGROUND is a zoonotic protozoan capable of infecting warm-blooded animal species and humans. Although toxoplasmosis presents mostly as mild or asymptomatic infection in immunocompetent individuals, in unborn children and people with weakened immune systems, the disease can be severe with ocular, neurological or multi-systemic manifestations and even death.AIMWe aimed to collate and analyse data on seroprevalence in humans to model and compare age-dependent prevalence in geographic regions in Europe.

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