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Current research on artificial aldolases predominantly centers on aldehyde substrates with relatively limited exploration of ketone substrates. Here, we report the creation of a novel artificial aldolase based on apo-myoglobin by embedding an organocatalytic secondary amine cofactor in the protein's distal pocket. The designer enzyme exhibits good to excellent enantioselectivities (up to 97.5:2.5 er) for couplings of acetone with diverse aldehyde substrates. This work establishes apo-myoglobin as a versatile chassis for integrating abiological organocatalysts and demonstrates that combining non-natural cofactors with directed evolution can unlock C-C bond-forming reactivities.
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http://dx.doi.org/10.1021/acs.orglett.5c03309 | DOI Listing |
Org Lett
September 2025
School of Life Sciences and Health Engineering, Jiangnan University, Wuxi 214122, China.
Current research on artificial aldolases predominantly centers on aldehyde substrates with relatively limited exploration of ketone substrates. Here, we report the creation of a novel artificial aldolase based on apo-myoglobin by embedding an organocatalytic secondary amine cofactor in the protein's distal pocket. The designer enzyme exhibits good to excellent enantioselectivities (up to 97.
View Article and Find Full Text PDFNat Metab
August 2024
Key Laboratory of Molecular Biophysics of Ministry of Education, Hubei Bioinformatics and Molecular Imaging Key Laboratory, Center for Artificial Intelligence Biology, College of Life Science and Technology, Huazhong University of Science and Technology, Wuhan, China.
Lysine β-hydroxybutyrylation (Kbhb) is a post-translational modification induced by the ketogenic diet (KD), a diet showing therapeutic effects on multiple human diseases. Little is known how cellular processes are regulated by Kbhb. Here we show that protein Kbhb is strongly affected by the KD through a multi-omics analysis of mouse livers.
View Article and Find Full Text PDFNat Commun
July 2024
Materials Science and Engineering Program, University of California, San Diego, La Jolla, CA, 92093, USA.
The sensitivity and responsiveness of living cells to environmental changes are enabled by dynamic protein structures, inspiring efforts to construct artificial supramolecular protein assemblies. However, despite their sophisticated structures, designed protein assemblies have yet to be incorporated into macroscale devices for real-life applications. We report a 2D crystalline protein assembly of L-rhamnulose-1-phosphate aldolase (RhuA) that selectively blocks or passes molecular species when exposed to a chemical trigger.
View Article and Find Full Text PDFJ Am Chem Soc
August 2024
State Key Laboratory of Urban Water Resource and Environment, School of Chemistry and Chemical Engineering, Harbin Institute of Technology, 92 West Da-Zhi Street, Harbin 150001, China.
The bottom-up construction of artificial cells is beneficial for understanding cell working mechanisms. The glycolysis metabolism mimicry inside artificial cells is challenging. Herein, the glycolytic pathway (Entner-Doudoroff pathway in archaea) is reconstituted inside artificial cells.
View Article and Find Full Text PDFFish Shellfish Immunol
September 2024
Fisheries College of Guangdong Ocean University, Shenzhen Institute of Guangdong Ocean University, Guangdong Provincial Key Laboratory of Aquatic Animal Disease Control and Healthy Culture, Guangdong, China. Electronic address:
Fish nocardiosis is a chronic disease mainly caused by Nocardia seriolae, which occurs in a variety of economically cultured freshwater and marine fish. Studies have shown that DNA vaccine is an effective treatment to protect fish from bacterial infection. In our previous experiment, an in vivo-induced gene of N.
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