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The versatile non-biodegradable material plastic has significantly enhanced innovation, but its production heavily relies on fossil fuels and non-renewable resources, which causes severe pollution and ecosystem disruption, highlighting the urgent need for eco-friendly alternatives. Polyhydroxyalkanoates (PHA) are a class of bioplastics that offer a promising solution as biodegradable, environmentally compatible, and versatile biopolymer synthesized by microorganisms using various substrates, aiding in organic waste management. This study was aimed to isolate and profile PHA producing bacteria from diverse sources such as soil, compost, landfill site, and sewage in Nepal. The initial screening of bacteria was performed by Sudan Black B dye, followed by secondary screening with the more specific Nile Blue A dye to detect PHA accumulation. Out of 343 isolates, 81 were confirmed positive for PHA production which were further processed for PHA extraction. The isolates Ht3d (12.76 ± 1.854%), Nk3e (22.748 ± 3.608%), Mn7d (14.24 ± 2.223%), and Dg5c (14.952 ± 3.401%) from soil, compost, landfill, and sewage respectively, showed the highest PHA accumulation and were biochemically identified as Bacillus circulans, Bacillus subtilis, Staphylococcus aureus, Staphylococcus spp., respectively. The yield ratio for isolate Ht3d significantly increased by 2.74 fold under the optimal conditions (pH 7, 35 °C, and 48 h with glucose as carbon source) which was 34.99 ± 5.61% having titer value of 0.82 g/L and production rate of 0.034 g/L/h with respect to 2.4 g/L of cell biomass. The production rate and dry cell weight of other isolates were also enhanced under different optimal conditions. The characterization of the produced biopolymer through UV-Visible spectrophotometry provided maximum absorbance at 232 nm and the FT-IR spectroscopy indicated the presence of O-H and C-H vibrations along with C = O, C-O-C stretching which collectively confirmed the presence of PHA.
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http://dx.doi.org/10.1186/s12866-025-04314-8 | DOI Listing |
Int J Environ Health Res
September 2025
PhD Program in Sciences Mentioning Applied Molecular and Cell Biology, La Frontera University, Temuco, Chile.
Changes in consumption patterns, urbanization, and industrialization have led to the generation of large volumes of municipal solid waste (MSW), posing threats to environmental sustainability. This study aimed to compost the organic fraction of municipal solid waste (OFMSW) using three composting methods: windrow (WC), pit (PC), and drum composting (DC). Distilled water was used in compost preparation and sample analysis.
View Article and Find Full Text PDFMicrobes Environ
September 2025
Research Field in Agriculture, Agriculture Fisheries and Veterinary Medicine Area, Kagoshima University.
Sweet potato foot rot disease caused by Diaporthe destruens (formerly Plenodomus destruens) severely affects the yield and quality of sweet potatoes. To gain basic knowledge on regulating the pathogen using indigenous soil bacteria, the following organic materials were applied to potted soils collected from a sweet potato field contaminated with D. destruens: Kuroihitomi (compost made from shochu waste and chicken manure), Soil-fine (material made by adsorbing shochu waste on rice bran), and rice bran.
View Article and Find Full Text PDFFungal Biol
October 2025
Microbiology, Department of Biology, Utrecht University, Utrecht, the Netherlands. Electronic address:
Agaricus bisporus is grown commercially on compost topped with a peat-based casing layer. Water is translocated from compost and casing to enable formation of mushrooms. Here, water translocation from casing and different parts of the compost into mushrooms was studied and linked to their water potential and contributing factors thereof: i.
View Article and Find Full Text PDFMicrobiol Res
September 2025
College of Resources and Environmental Science, State Key laboratory of nutrient use and management, China Agricultural University, Beijing 100193, China. Electronic address:
A comprehensive understanding of the interplay between agricultural practices and the rhizosphere microbiome particularly the role of root exudates is essential for harnessing microbial potential in sustainable agriculture. In this study, we investigated how disease-suppressive soil alters root exudate profiles in pepper plants and how these elevated exudates influence rhizosphere microbiome assembly and modulate the antagonistic activity of Bacillus methylotrophicus 400 (BM400) against Phytophthora capsici. GC-MS analysis identified distinct compositional profiles of root exudates in the disease-suppressive soil, with marked enrichment of seven compounds.
View Article and Find Full Text PDFISME Commun
January 2025
Department of Microbial Ecology, Netherlands Institute of Ecology (NIOO-KNAW), PO Box 50, 6700AB Wageningen, the Netherlands.
The global atmospheric concentration of the potent greenhouse gas methane (CH) is rising rapidly, and agriculture is responsible for 30%-50% of the yearly CH emissions. To limit its global warming effects, strong and sustained reductions are needed. Sustainable agricultural management strategies, as the use of organic amendments like compost, have previously proven to have a potent CH mitigation effect in laboratory experiments.
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