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Spherical nucleic acids (SNAs) are radially packed, highly dense DNA "forests" on nanoparticle cores, depicting a useful class of artificially engineered bionanomaterials. The widespread uses of SNAs in diverse chemistry and nanotechnology areas have driven their synthetic innovations toward reduced time/cost and ever-improved quality. Different from existing methods based on salt-aging, low-pH, freezing, and dehydration conditions, herein a speedy and facile way is reported to produce SNAs in miscible aqueous-alcoholic media with easily adjustable solvent polarities. Critically, it is discovered that the non-aqueous environment of a water/isopropanol (IPA) mixture plays a vital role in affecting DNA interaction with gold nanoparticles (AuNPs) via different surface-anchoring groups. In addition to significantly accelerated DNA conjugation on AuNPs, the IPA-based strategy achieves various unprecedented controls on the formation of SNAs. These unique features include enhanced DNA adsorption (and ligand desorption) on AuNPs and the possibility of using gold-alkyne linkage for a rapid SNA preparation. Highly efficient SNA syntheses are achieved based on unmodified, thiolated, and alkynated DNA. Moreover, solvent-programmed directionality control of DNA grafts on AuNPs is realized based on alkyne/phosphorothioate dual-functionalities, which is otherwise unrealizable. The high effectiveness of the IPA-based method points to a previously unconsidered microenvironment-related DNA-nanoparticle interaction for innovating SNA synthesis.
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http://dx.doi.org/10.1002/smll.202507358 | DOI Listing |
Spectrochim Acta A Mol Biomol Spectrosc
September 2025
Changchun Veterinary Research Institute, Chinese Academy of Agricultural Sciences, Changchun 130122, China. Electronic address:
To achieve ultrasensitive and real-time detection of the H1N1 influenza virus, this study designed a nucleic acid-free fluorescent biosensor based on 3D spherical DNA nanostructure and CRISPR/Cas12a (3D-SDNC). The biosensor constructs a rigid 3D nano-framework via self-assembly of six oligonucleotide chains, with H1N1-specific nucleic acid aptamers and Cas12a activator strands strategically positioned at multi-spined vertices for precise spatial coupling between viral recognition and signal transduction. Upon aptamer-virus binding, the induced conformational change liberates the activator strand, thereby activating the trans-cleavage activity of the Cas12a/crRNA complex to efficiently cleave the HEX/BHQ1 double-labeled fluorescent probe and initiate cascade signal amplification.
View Article and Find Full Text PDFColloids Surf B Biointerfaces
September 2025
School of Biomedical Engineering (Suzhou), Division of Life Sciences and Medicine, University of Science and Technology of China, Hefei 230026, China; Department of Biomaterials and Stem Cells, Suzhou Institute of Biomedical Engineering and Technology, Chinese Academy of Science (CAS), Suzhou 215163,
Bacterial infections and the associated inflammatory responses present significant challenges to public health, underscoring the need for innovative therapeutic strategies. In this study, novel carbon dots (QA-CDs) derived from quercetin (QU) and 4-aminophenol (4-AP) were synthesized using a one-step hydrothermal method. This approach merges the antimicrobial properties of phenolic compounds with the multifunctional advantages of carbon-based nanomaterials.
View Article and Find Full Text PDFProc Natl Acad Sci U S A
September 2025
Department of Chemistry and International Institute for Nanotechnology, Northwestern University, Evanston, IL 60208.
Genome editing with CRISPR-Cas systems hold promise for treating a wide range of genetic disorders and cancers. However, efficient delivery of genome editors remains challenging due to the requirement for the simultaneous delivery or intracellular generation of Cas proteins, guide RNAs, and, in some applications, donor DNAs. Furthermore, the immunogenicity and toxicity of delivery vehicles can limit the safety and efficacy of genetic medicines.
View Article and Find Full Text PDFNat Chem
September 2025
Department of Chemistry, University of Oxford, Oxford, UK.
The flexible and modular design of synthetic cells, comprising lipid vesicles capable of imitating the structure and function of living cells, facilitates their application as drug delivery devices. The ability to control the synthesis of biomolecules within synthetic cells using a tissue-penetrating stimulus opens up additional levels of functionality that has the potential to improve biological potency and circumvent drug leakage from preloaded vesicles. To this end, we have designed spherical nucleic acids comprising DNA promoter sequences decorating magnetic nanoparticle cores.
View Article and Find Full Text PDFSci Adv
August 2025
China National Center for Bioinformation, Beijing, China.
The measurement of three-dimensional genome folding in the nucleus, mostly through Hi-C methods, is expressed as contact frequencies between genomic segments, without anchoring to physical axes of the spherical nucleus. Here, we mapped the chromatin contacts along nuclear radial axis and built radial score by factoring in contact frequencies. The chromatin high-order structures exhibit rich diversity along radial axis.
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