98%
921
2 minutes
20
Marine macroalgae-associated play crucial roles in global carbon cycling through polysaccharide degradation, yet their taxonomic and functional diversity remains understudied. Here, we describe six novel species (strains 3-376, 4-2040, 2-473A, 4-528, 4-911 and 463) within the families , , and isolated from macroalgal surfaces in the coastal area of Weihai, China. Metagenomic read recruitment and 16S rRNA abundance analyses demonstrated host-specific associations. Integrative taxonomic analyses, including phylogenomics (120 conserved proteins), 16S rRNA sequencing, and chemotaxonomy (e.g., MK-6 quinones, phosphatidylethanolamine lipids, and iso-C fatty acids), confirmed their novel status, with average amino acid identity (AAI), percentage of conserved proteins (POCP) distinguishing them from related taxa. Genomes (3.3-7.1 Mb; G + C 31.7-45.3%) revealed diverse polysaccharide utilization loci (PULs) targeting algal glycans like laminarin, alginate, and sulfated polymers (ulvan, chondroitin sulfate). 463 harbored the richest CAZyme/PUL repertoire (131 CAZymes, 15 PULs), while 4-911 lacked PULs, highlighting family-level specialization. This study expands the known diversity of core phycosphere , linking PUL evolution to habitat specialization. The novel species' distinct degradative capacities underscore their ecological roles in algal carbon processing and potential for biotechnological applications. Our integrated taxonomy-genomics approach advances understanding of microbial contributions to marine ecosystem dynamics.
Download full-text PDF |
Source |
---|---|
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC12313589 | PMC |
http://dx.doi.org/10.3389/fmicb.2025.1642517 | DOI Listing |
Front Immunol
September 2025
Department of Medicine, Division of Hematology, Bioclinicum and Center for Molecular Medicine, Karolinska Institute and Karolinska University Hospital Solna, Stockholm, Sweden.
Background: Metabolic reprogramming is an important hallmark of cervical cancer (CC), and extensive studies have provided important information for translational and clinical oncology. Here we sought to determine metabolic association with molecular aberrations, telomere maintenance and outcomes in CC.
Methods: RNA sequencing data from TCGA cohort of CC was analyzed for their metabolic gene expression profile and consensus clustering was then performed to classify tumors into different groups/subtypes.
Ann Bot
September 2025
Laboratório de Fisiologia Ecológica de Plantas, Departamento de Botânica, Instituto de Biociências, Universidade de São Paulo, Brasil.
Background And Aims: Aerenchyma formation has emerged as a promising model for understanding cell wall modifications. Certain cells undergo programmed cell death (PCD), while others do not, suggesting the existence of a tightly regulated signaling dispersion mechanism. Cell-to-cell communication occurs via plasmodesmata, whose permeability is regulated by the deposition of callose (β-1,3-glucan) and its degradation by β-1,3-glucanase.
View Article and Find Full Text PDFPLoS One
September 2025
Department of Science, LLP "Research and Production Enterprise "Innovator", Astana, Kazakhstan.
This study investigates the physicochemical, microbiological, and microstructural changes in soft wheat grain during germination under varying moisture conditions: moderately dry, moist, and wet. Pre-harvest sprouting can severely compromise grain quality and usability; however, understanding germination-induced changes offers insights into potential utilization strategies. Physical parameters-including thousand-kernel weight, test weight, and falling number-showed strong correlation with germination time, decreasing by 8.
View Article and Find Full Text PDFMicrobiologyopen
October 2025
Department of Biochemistry, Faculty of Science and Technology, Chiromo Campus, Off Riverside Drive, University of Nairobi, Nairobi, Kenya.
Alkaline pectinases are in demand in industrial processes that require the degradation of plant pectins at high pH, for example, removal of pectin stains from fabrics, cutlery, and porcelain; treatment of pectic wastewater; fermentation of coffee, tea, and cocoa; manufacture of poultry and animal feeds, and processing of textiles, and so forth. The present study aimed to (a) screen four alkaliphilic microbial isolates, previously obtained from samples collected around Lake Bogoria (soda lake), Baringo County, Kenya, for alkaline pectinases, and (b) characterize the pectinase-producers. The screening data revealed that all the isolates were pectinase producers, exhibiting catalytic activities that ranged from 1.
View Article and Find Full Text PDFFood Res Int
November 2025
College of Food Science and Technology, Nanjing Agricultural University, Nanjing 210095, PR China. Electronic address:
Flammulina velutipes is a major edible fungus with abundant yield and mature industrial production technology. Its main functional component, Flammulina velutipes polysaccharide, has huge development and utilization value. In light of the current uncertainty regarding the mechanisms by which Flammulina velutipes polysaccharides prevent colonic cell pyroptosis, the mechanisms of ultrasound-extracted Flammulina velutipes polysaccharide (FVPU2) in inhibiting colonic cell pyroptosis in mice were investigated, and compared with Flammulina velutipes polysaccharide extracted via hot water extraction (FVPH2).
View Article and Find Full Text PDF