Complete Mitochondrial Genome of (Cypriniformes, Cyprinidae, and Acheilognathinae): Characterization and Phylogenetic Analysis.

Ecol Evol

The Observation and Research Field Station of Taihang Mountain Forest Ecosystems of Henan Province College of Life Sciences, Henan Normal University Xinxiang People's Republic of China.

Published: August 2025


Category Ranking

98%

Total Visits

921

Avg Visit Duration

2 minutes

Citations

20

Article Abstract

In this study, the mitochondrial genome data of were subjected to a multigene tandem method to elucidate its taxonomic status. The total length of the mitochondrial genome was determined to be 16,779 bp, including 13 protein-coding genes, 2 rRNA genes, 22 tRNA genes, and the D-loop region. Overall, there was a strong AT bias and anti-G bias; different protein-coding genes exhibited different degrees of codon preference. The rest of the amino acids, with the exception of tRNA, of the 22 tRNAs were in one form, the secondary structure was incomplete, and the remaining tRNAs folded to form the secondary structure of a typical clover. Thirteen protein-coding genes of and were concatenated to explore their phylogenetic relationships, with as the outgroup. The results revealed that , , and were the most closely related. This research would supplement the mitochondrial genome data, serving as a molecular basis for safeguarding species, facilitating genetic classification, and investigating Acheilognathinae phylogeny.

Download full-text PDF

Source
http://www.ncbi.nlm.nih.gov/pmc/articles/PMC12318612PMC
http://dx.doi.org/10.1002/ece3.71909DOI Listing

Publication Analysis

Top Keywords

mitochondrial genome
16
protein-coding genes
12
genome data
8
form secondary
8
secondary structure
8
genes
5
complete mitochondrial
4
genome
4
genome cypriniformes
4
cypriniformes cyprinidae
4

Similar Publications

The family Syngnathidae includes seahorses, sea dragons, and pipefishes. We sequenced the complete mitochondrial DNA (mtDNA) genome of the belly pipefish, Bleeker, 1849. The genome is 16,646-bp long, and includes the standard complement for bony fishes of 13 protein-coding genes, 22 tRNA genes, two rRNA genes, and a control region, in the same order and strand distribution as other syngnathids.

View Article and Find Full Text PDF

Tachinid flies act as key biological vectors in elucidating plant-insect-microbe dynamic interactions. We report the mitochondrial genome sequence of from China. The mitogenome spans 14,775 base pairs in length, with a GC content of 21.

View Article and Find Full Text PDF

Comparative analysis of the mitochondrial genome of whip scorpion, (Butler, 1872) (Arachnida: Thelyphonidae) with phylogenetic implication.

J Genet

September 2025

The Co-Innovation Center for Sustainable Forestry in Southern China, College of Life Sciences, Nanjing Forestry University, Nanjing 210037, People's Republic of China.

The complete mitogenome of the common Chinese whip scorpion, (Butler, 1872) was sequenced and compared with another Uropygid mitogenome of (Lucas, 1835). Structural divergences include the absence of one tRNA-Leu and strand inversions in four protein coding genes (PCGs). All PCGs showed K/K ratios-1, which indicates purifying selection, with COI (0.

View Article and Find Full Text PDF

Background: Prostatic diseases, consisting of prostatitis, benign prostatic hyperplasia (BPH), and prostate cancer (PCa), pose significant health challenges. While single-omics studies have provided valuable insights into the role of mitochondrial dysfunction in prostatic diseases, integrating multi-omics approaches is essential for uncovering disease mechanisms and identifying therapeutic targets.

Methods: A genome-wide meta-analysis was conducted for prostatic diseases using the genome-wide association studies (GWAS) data from FinnGen and UK Biobank.

View Article and Find Full Text PDF

An iPSC-derived neuronal model reveals manganese's role in neuronal endocytosis, calcium flux and mitochondrial bioenergetics.

iScience

September 2025

Department of Developmental Neurosciences, Zayed Centre for Research into Rare Disease in Children, Great Ormond Street Institute of Child Health, University College London, London, UK.

Manganese (Mn) is an essential trace metal required for normal biological function, yet it also poses neurotoxic risks when dysregulated. Maintaining proper intracellular and extracellular Mn levels is critical, as Mn imbalance has been implicated in a spectrum of human diseases-including inherited Mn transport disorders, acquired manganism, and more prevalent neurodegenerative diseases such as Parkinson's and Alzheimer's disease. Despite these associations, the cellular mechanisms driving Mn-induced neuropathology remain poorly understood.

View Article and Find Full Text PDF