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Sediments contain complex chemical mixtures. While effect-directed analysis (EDA) combined with nontarget screening (NTS) is promising, its large-scale application has been limited by time-consuming workflows. Here, we developed an event-driven taxonomy (EDT)-Screening strategy to effectively identify and semiquantify nontarget bioactive contaminants in sediment, taking aryl hydrocarbon receptor (AhR) activity as an example. To accelerate EDA and NTS workflows, this strategy integrated fractionation, bioassay, identification, and quantification into a single step by embedding two novel effect-based spectral libraries into LC-HRMS screening templates. The event driver (ED) library was assembled from data-mined AhR-active compounds, and the event driver ion (EDION) library contained effect-related fragment ions predicted by deep learning. Compared to conventional databases (e.g., ChemSpider), the AhR-ED library improved identification accuracy with a more complete AhR-agonist list and fewer false positives, while the AhR-EDION library uncovered additional AhR agonists, particularly industrial intermediates and transformation products often missed due to limited prior knowledge. With the multimodal learning-based semiquantitative module, the EDT-Screening strategy increased the explained bioactivity contribution from 7.1% to 82%, significantly expanding the detections of "unknown unknowns". Our findings show that effect-based HRMS libraries provided a rapid solution for identifying and prioritizing bioactive contaminants in complex chemical mixtures, advancing EDA-NTS workflows for environmental risk assessment.
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http://dx.doi.org/10.1021/acs.est.5c07344 | DOI Listing |
IEEE J Biomed Health Inform
August 2025
This study introduces PicoSleepNet, an ultra-lightweight sleep stage classification method that utilizes a spiking neural network (SNN) with single-channel electroencephalogram (EEG) signals. Traditional methods use multi-bit Nyquist sampling and dense computing, which result in high complexity and power consumption, hindering their deployment on wearable devices. To address these limitations, we propose an innovative pipeline combining single-bit sub-Nyquist level-crossing sampling (LCS) and sparse computing based on SNN.
View Article and Find Full Text PDFIEEE J Biomed Health Inform
July 2025
Targeting the real-time arrhythmia diagnosis on resource-limited edge devices, in this paper, we present a lightweight electrocardiogram classification system using event-driven machine learning processing. A self-personalized anomaly detector based on signal processing is newly developed to dynamically update internal decision criteria from each patient's recent electrocardiogram history, that activates the following machine learning model only for the abnormal cases. A Siamese neural network is adopted to identify detailed arrhythmia classes by comparing features from the self-personalized normal data and the current abnormal input, increasing the classification accuracy.
View Article and Find Full Text PDFEnviron Sci Technol
July 2025
Guangdong Provincial Key Laboratory of Environmental Pollution and Health, College of Environment and Climate, Jinan University, Guangzhou 511443, China.
Sediments contain complex chemical mixtures. While effect-directed analysis (EDA) combined with nontarget screening (NTS) is promising, its large-scale application has been limited by time-consuming workflows. Here, we developed an event-driven taxonomy (EDT)-Screening strategy to effectively identify and semiquantify nontarget bioactive contaminants in sediment, taking aryl hydrocarbon receptor (AhR) activity as an example.
View Article and Find Full Text PDFFront Neurosci
June 2025
Department of Measurement and Electronics, AGH University of Krakow, Kraków, Poland.
Event-driven systems can operate either on discrete-time event streams or on analog signals transformed into the event domain by a predefined encoding scheme. This paper studies the problem of optimal event-based signal encoding if data are to be processed by a machine learning model, such as the spiking neural network (SNN). We introduce a method of encoding parameter selection that evaluates a k-Nearest Neighbor (k-NN) classifier operating on a measure of the event stream distance in multiple trials of a Bayesian optimization process.
View Article and Find Full Text PDFBioengineering (Basel)
June 2025
Auckland Bioengineering Institute, The University of Auckland, Auckland 1010, New Zealand.
Artificial intelligence (AI) is revolutionising neuroimaging by enabling automated analysis, predictive analytics, and the discovery of biomarkers for neurological disorders. However, traditional artificial neural networks (ANNs) face challenges in processing spatiotemporal neuroimaging data due to their limited temporal memory and high computational demands. Spiking neural networks (SNNs), inspired by the brain's biological processes, offer a promising alternative.
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