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The Basic Leucine Zipper (bZIP) transcription factors play a vital role in plant responses to abiotic stress. Despite being studied in various plant species, the function of the gene family in Soapberry ( Gaertn.), a significant tree species for forestry biomass energy, remains unclear. In this study, we conducted a genome-wide analysis of the gene family in Soapberry, based on the observation that bZIP transcription factors were enriched in the transcriptome data of Soapberry-grafted stem segments, as revealed by both GO and KEGG analyses. For the first time, we identified 31 s and provided detailed information regarding their physicochemical characteristics, gene structures, protein motifs, phylogenetic relationships, regulatory elements (CREs), and predicted transcriptional regulatory networks. According to our prediction of the -mediated regulatory network and CREs in the promoter region, s may be associated with plant growth and development as well as responses to mechanical wounding stress. By integrating RT-qPCR and RNA-seq analyses, we determined that the expression patterns of s were specific to the graft-healing stages and locations. In conclusion, our study elucidates the potential role of the gene family in responding to plant wounding stress and facilitating graft healing, thereby providing valuable insights for future functional genomics studies of Soapberry.
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http://dx.doi.org/10.3390/ijms26104862 | DOI Listing |
Front Plant Sci
August 2025
Nanfan Research Institute, Chinese Academy of Agricultural Sciences (CAAS), Sanya, Hainan, China.
Introduction: Transcription factors (TFs) are essential regulators of gene expression, orchestrating plant growth, development, and responses to environmental stress. , a halophytic species renowned for its exceptional salt resistance, provides an ideal model for investigating the regulatory mechanisms underlying salt tolerance.
Methods: Here, we present a comprehensive genome-wide identification and characterization of TFs in .
Physiol Plant
September 2025
College of Natural Resource and Environment, Northwest A&F University, Yangling, Shaanxi, China.
Nitrogen (N) is essential for plant growth, but excessive fertilizer use decreases nitrogen use efficiency (NUE) and raises environmental concerns. This study investigated the effect of exogenous abscisic acid (ABA; 50 μM) application on rapeseed (Brassica napus L.) plants under hydroponic conditions with high (7.
View Article and Find Full Text PDFRinsho Ketsueki
September 2025
Department of Hematology, Rheumatology and Infectious Diseases, Kumamoto University Faculty of life Sciences.
Adult T-cell leukemia-lymphoma (ATL) is a malignancy of peripheral CD4+ T cells induced by human T-cell leukemia virus type 1 (HTLV-1). HTLV-1 encodes two oncogenic viral factors, Tax and HTLV-1 bZIP factor (HBZ) in the sense and antisense strands of the provirus respectively. Both Tax and HBZ dysregulate the expression and activities of a large number of host genes and cellular signaling pathways via their multimodal functions.
View Article and Find Full Text PDFPlant Biotechnol J
September 2025
Zhejiang Provincial International S&T Cooperation Base for Active Ingredients of Medicinal and Edible Plants and Health, Zhejiang Provincial Key TCM Laboratory for Chinese Resource Innovation and Transformation, School of Pharmaceutical Sciences, Zhejiang Chinese Medical University, Zhejiang, Hangzh
Salvia miltiorrhiza produces pharmacologically bioactive diterpenoid tanshinones which are regulated by jasmonate (JA) and abscisic acid (ABA) signalling, while their crosstalk in this process remains unclear. Here, we demonstrated that MeJA and ABA acted synergistically to enhance tanshinone biosynthesis. We reported that a novel bZIP transcription factor, SmbZIP5, was involved in ABA- and JA-induced tanshinone biosynthesis.
View Article and Find Full Text PDFGenes (Basel)
August 2025
Institute of Tillage and Cultivation, Heilongjiang Academy of Agricultural Sciences, Harbin 150088, China.
Low-temperature stress during the grain-filling stage negatively affects rice grain quality and yield. Understanding the physiological and molecular mechanisms underlying cold tolerance is critical for breeding rice varieties with improved resilience. In this study, eight rice varieties with differential cold tolerance-LD1603, 13108, LD18, and 4-1021 (cold-tolerant) and LD3, LD4, LD121, and LD1604 (cold-sensitive)-were subjected to 17.
View Article and Find Full Text PDF