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The multi-national Materials Corrosion Test (MaCoTe), being conducted at the Grimsel Test Site in Switzerland, assesses the stability of bentonite as it may be utilized within deep geological repositories (DGRs), which are proposed for the safe, long-term disposal of used nuclear fuel. This experiment provides an opportunity for long-term assessments of changes in microbial communities associated with compacted subsurface bentonite samples exposed to a natural groundwater. Leveraging samples from MaCoTe, herein, we report temporal data for the abundance and community composition of microorganisms associated with compacted bentonite samples emplaced over 7 years under subsurface conditions. Phospholipid fatty acid analysis, 16S rRNA gene quantification and sequencing, cultivation, and natural organic matter analyses all indicated no significant changes for microbial community abundances associated with inner layers of bentonite samples over the 7 years. While microbial abundances did not change in the inner layers, the PLFA data suggest potential changes in microbial community composition and could also indicate prolonged microbial turnover rates. Overall, the results support microbial stability in compacted bentonite exposed to DGR-like conditions for at least 7 years.IMPORTANCELong-term assessments of changes in microbial activity in compacted low-biomass bentonite systems analogous to deep geological repositories (DGRs) are critical to test conditions for stable engineered bentonite barrier components. This study assesses long-term temporal changes in microbial communities of compacted bentonites exposed to natural groundwater. It offers 7-year data that indicate stability of bentonite-based materials intended for use in engineered barrier systems of a DGR for the safe, long-term disposal of used nuclear fuel, with wider implications for microbial persistence in a deep subsurface environment.
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http://dx.doi.org/10.1128/aem.01950-24 | DOI Listing |
Am J Respir Cell Mol Biol
September 2025
University of Toronto, Interdepartmental Division of Critical Care Medicine, Toronto, Ontario, Canada.
Post-Intensive Care Syndrome (PICS) is a serious condition involving physical weakness, depression, and cognitive impairment that develop during or after an intensive care unit (ICU) stay, often resulting in long-term declines in quality of life. Patients with acute respiratory distress syndrome (ARDS) and severe COVID-19 are at particularly high risk, yet the molecular mechanisms underlying PICS remain poorly understood. Here, we identify impaired Apelin-APJ signaling as a potential contributor to PICS pathogenesis via disruption of inter-organ homeostasis.
View Article and Find Full Text PDFPLoS Biol
September 2025
Environmental Genomics and Systems Biology, Lawrence Berkeley National Laboratory, Berkeley, California, United States of America.
Inter-laboratory replicability is crucial yet challenging in microbiome research. Leveraging microbiomes to promote soil health and plant growth requires understanding underlying molecular mechanisms using reproducible experimental systems. In a global collaborative effort involving five laboratories, we aimed to help advance reproducibility in microbiome studies by testing our ability to replicate synthetic community assembly experiments.
View Article and Find Full Text PDFCurr Biol
August 2025
National Key Laboratory of Green Pesticide, Guangzhou 510642, China; Key Laboratory of Crop Integrated Pest Management in South China, Ministry of Agriculture, South China Agricultural University, Guangzhou 510642, China. Electronic address:
Plant viruses are known to indirectly manipulate insect vector behavior by altering host-plant phenotypes, yet the mechanisms by which they directly regulate vector behavior to enhance transmission remain poorly understood. Here, we reveal how the southern rice black-streaked dwarf virus (SRBSDV) reprograms the host preference of its planthopper vector, Sogatella furcifera, from infected to healthy rice plants by disrupting immune-olfactory crosstalk. We demonstrate that the SRBSDV-encoded P8 protein competitively binds to the S.
View Article and Find Full Text PDFJ Infect Dis
September 2025
Section of Infectious Diseases, Yale School of Medicine, New Haven, CT, USA.
Background: Women are disproportionately affected by neuropsychiatric symptoms following recovery from acute COVID-19. However, whether there are central nervous system-specific changes in gene expression in women with neuropsychiatric Long COVID (NP-Long COVID) remains unknown.
Methods: Twenty-two women with and ten women without NP-Long COVID were enrolled from New Haven, CT, and the surrounding region and consented to a blood draw and large volume lumbar puncture.
FEMS Microbiol Ecol
September 2025
School of Biological Sciences, University of Auckland, 3A Symonds Street, Auckland, New Zealand, 1142.
The relationship between, and joint selection on, a host and its microbes-the holobiont-can impact evolutionary and ecological outcomes of the host and its microbial community. We develop an agent-based modelling framework for understanding the ecological dynamics of hosts and their microbiomes. Our model incorporates numerous microbial generations per host generation allowing selection on both host and microbes.
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