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The design of self-assembling peptides has garnered significant attention in scientific research. While alpha-helical assemblies have been extensively studied, exploration of polyproline type II (PPII) helices, such as those found in collagen, remains relatively limited. In this study, we focused on understanding the sequence-structure relationship in hierarchical assemblies of collagen-like peptides, using defense collagen SP-A as a model. By dissecting the sequence derived from SP-A and synthesizing short collagen-like peptides, we successfully constructed a discrete bundle of hollow triple helices. Mutation studies pinpointed amino acid sequences, including hydrophobic and charged residues that are critical for oligomer formation. These insights guided the design of collagen-like peptides, resulting in the formation of diverse quaternary structures, including discrete and heterogenous bundled oligomers, 2D nanosheets, and pH-responsive nanoribbons. Our study represents a significant advancement in the understanding and harnessing of collagen higher-order assemblies beyond the triple helix.
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http://dx.doi.org/10.1101/2024.05.14.594194 | DOI Listing |
Adv Sci (Weinh)
August 2025
Departments of Chemistry and Bioengineering, Rice University, Houston, TX, 77005, USA.
Collagen, the most abundant protein by mass in mammals, features a triple-helical structure composed of three intertwined peptide strands. Nonequivalent strands can assemble, forming heterotrimeric structures, which are more prevalent among natural collagens. However, the design and application of heterotrimeric collagen mimetic peptides (CMPs) are constrained by the potential formation of competing compositions and registers, which impede the formation of target assemblies.
View Article and Find Full Text PDFNat Commun
August 2025
Structural Biology Brussels, Vrije Universiteit Brussel, Brussels, Belgium.
For over 100 years, Bacillus thuringiensis (Bt) has been used as an agricultural biopesticide to control pests caused by insect species in the orders of Lepidoptera, Diptera, and Coleoptera. Under nutrient starvation, Bt cells differentiate into spores and associated toxin crystals that can adopt biofilm-like aggregates. We reveal that such Bt spore/toxin biofilms are embedded in a fibrous extrasporal matrix, and using cryoID, we resolved the structure and molecular identity of an uncharacterized type of pili, referred to here as Fibrillar ENdospore Appendages or F-ENA.
View Article and Find Full Text PDFJ Control Release
August 2025
Inner Mongolia Key Laboratory for Molecular Regulation of the Cell, School of Life Sciences, Inner Mongolia University, Hohhot 010020, China. Electronic address:
Protein-based drug delivery systems offer advantages such as genetic tunability, structural homogeneity, and high biocompatibility. However, precisely controlling the assembly of protein nanoparticles and establishing correlations between their macroscopic properties and molecular architecture remain significant challenges. Here, inspired by chimeric collagen-like proteins, we rationally designed a series of de novo chimeric proteins comprising an N-terminal globular domain fused to a linear collagen-like domain.
View Article and Find Full Text PDFColloids Surf B Biointerfaces
December 2025
Organic & BioorganicChemistry Laboratory, Council of Scientific and Industrial Research (CSIR) -Central Leather Research Institute (CLRI), Adyar, Chennai 600020, India; Academy of Scientific and Innovative Research (AcSIR), Ghaziabad 201002, India. Electronic address:
Surface-active peptides (SAPs) typically mimic conventional surfactants by featuring long non-polar (hydrophobic) peptide tails and short polar (hydrophilic) heads consisting of a single amino acid or short peptide. However, reverse-structure SAPs-with a long hydrophilic tail and short hydrophobic head-remain largely unexplored. If developed, such SAPs could form micelles with a larger hydrophilic area and a smaller hydrophobic core, leading to novel self-assembled structures.
View Article and Find Full Text PDFFish Shellfish Immunol
October 2025
College of Animal Science and Veterinary Medicine, Henan Institute of Science and Technology, Xinxiang, China; Postdoctoral Research Base, Henan Institute of Science and Technology, Xinxiang, China. Electronic address:
Collectin-11 (CL-11) is a multifunctional lectin that binds carbohydrates on pathogens and inhibits infection through direct neutralization, agglutination, opsonization and killing pathogens, playing an important role in innate immunity. In the present study, a homolog of collectin-11 (CL-11), designated as CcCL-11, was identified and functionally characterized from Yellow River carp (Cyprinus carpio haematopterus). Its expression profile and agglutination activity were systematically analyzed.
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