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Quantitative PCR (qPCR) is a well-established technique that allows to accurately quantify nucleic acids or proteins, being widely used in several types of biological samples for bacterial load quantification. However, there are many recent studies that do not consider the potential pitfalls involved in key experimental qPCR stages, namely, those related to the extraction and purification of genomic DNA and to the thermal amplification process, that can lead to biased results in mixed cultures. Herein, we outline a proper protocol for bacterial quantification by qPCR, addressing how to overcome the main issues in that methodology.
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http://dx.doi.org/10.1007/978-1-0716-3358-8_9 | DOI Listing |
Pestic Biochem Physiol
November 2025
Anhui Provincial Key Laboratory of Biological Control, Anhui Agricultural University, Hefei 230036, China. Electronic address:
Microbial consortia, involving two or more microorganisms, have been explored for pest management purposes, despite concerns regarding competitive exclusion among entomopathogenic fungi that may undermine synergistic effects. However, the precise molecular mechanisms governing entomopathogen competition in vivo remain inadequately elucidated. Here, we investigate competitive exclusion dynamics between two prominent entomopathogens, Metarhizium robertsii and Beauveria bassiana.
View Article and Find Full Text PDFFungal Biol
October 2025
School of Life Sciences, Nanjing Normal University, Nanjing, 210023, Jiangsu Province, China. Electronic address:
Urban green areas are vital yet underexplored reservoirs of microbial diversity in cities. This study examines myxomycete communities in Zijin Mountain National Forest Park, a subtropical urban forest in Nanjing, China, across four seasons and multiple forest types. Combining field collections and moist chamber cultures, we documented 60 species from 906 occurrence records.
View Article and Find Full Text PDFJ Microbiol Methods
September 2025
French Armed Forces Medical Directorate, Veterinary Quality Unit, Paris, France.
Foodborne diseases are caused by various pathogens and generally present with similar symptoms, mainly digestive disorders. Adopting a syndromic approach is therefore important when investigating foodborne disease outbreaks. This involves using multiplex PCR-based methods to test stool and food samples.
View Article and Find Full Text PDFBioresour Technol
September 2025
Key Laboratory of Industrial Ecology and Environmental Engineering, Ministry of Education (MOE), School of Environmental Science and Technology, Dalian University of Technology, Linggong Road 2, Dalian 116024, China. Electronic address:
This study investigated the effects of five representative biocarriers-biochar (BC), activated carbon (AC), nano-magnetite (NM), zero-valent iron (ZVI), and polyurethane sponge (PUS)-on chain elongation (CE) from ethanol/acetate in anaerobic systems. All carriers enhanced CE to varying extents. BC and NM significantly increased caproate yields (6032.
View Article and Find Full Text PDFBioorg Chem
September 2025
Department of Chemistry, Pondicherry University, Kalapet, Puducherry 605014, India. Electronic address:
Malaria, a protozoan parasitic disease caused by Plasmodium species, poses significant health risks in endemic regions and contributes to substantial morbidity and mortality. The intricate lifecycle of the parasite, coupled with the emergence of drug-resistant strains, has severely impacted the effectiveness of current anti-malarial treatments. In response, the present study attempts to demonstrate the blood-stage anti-plasmodial action of 30 triazole derivatives designed based on molecular hybridisation technique, and physicochemical properties.
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