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Evaluation of DFT calculated vibrational parameters for the IR and VCD spectra similarity of perezone (1) and dihydroperezone (2) was undertaken. Conformational sets were obtained using different search engines, and the parameters needed for spectra prediction were obtained using several combinations of commonly employed functionals and basis sets, and then weighted spectra were generated and compared with observed traces to provide infrared similarity (S ) and enantiomeric similarity index (ESI) values. These values evidenced a poor performance of the evaluated levels of theory that were overcome when using the individual scaling factors approach, providing 16% to 139% increases of the ESI values. The best performing level of theory was the B3LYP/DGDZVP2 with ESI values of 0.722 and 0.792 for 1 and 2. Moreover, a correlation analysis showed that the irregular DFT performance arises from rotational strength deviations, which suggests to discard conformational abundance accuracy as the main source of differences. Furthermore, a similarity guided conformational analysis showed that conformations with high ESI values prefer particular orientations of the CC bonds directly attached to the stereogenic carbon atom, with more distant dihedral angles having less influence. Additionally, folded and extended conformers appear to be equally capable to yield high individual ESI values, although abundances of folded conformers just account for 16% of the total population. Nevertheless, abundance optimization showed that a high ESI similarity value of 0.834, is possible when the population of these conformers is increased to 26%, suggesting that a larger abundance of these conformers might be present in solution.
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http://dx.doi.org/10.1002/chir.23517 | DOI Listing |
Fitoterapia
September 2025
College of Pharmacy, Chungbuk National University, Cheongju 28160, Republic of Korea. Electronic address:
Two previously undescribed polyketides, bukhansanketides A (1) and B (2), along with a γ-lactone-derived furanone, (S)-(-)-bukhansanfuranone (3), were isolated from Trichoderma spirale BHM2-5, together with four known compounds (4-7). Their structures were elucidated by 1D and 2D NMR spectroscopy and HR-ESI-MS data, as well as DP4+ probability analysis, the modified Mosher's method, or VCD calculations. All isolated compounds (1-7) were evaluated for their cytotoxic activities against A549, SK-OV-3, and HCT-8 cancer cell lines.
View Article and Find Full Text PDFZhongguo Zhong Yao Za Zhi
July 2025
Key Lab of Natural Product Chemistry and Application at Universities of Education Department of Xinjiang Uygur Autonomous Region, School of Chemistry and Chemical Engineering, Yili Normal University Yining 835000, China Jiangxi Provincial Key Laboratory of Natural and Biomimetic Drugs Research, Scho
Three taraxerane nortriterpenoids were isolated from mastic by using various modern chromatographic separation techniques. They were identified as(5R,8R,9R,10S,11S,12R,13S,17R,18R)-28-norlupa-11,12-epoxy-14-taraxerene-3,16-dione(1),(5R,8R,9R,10S,11S,12R,13S,17S,18S)-17-hydroxy-28-norlupa-11,12-epoxy-14-taraxerene-3-one(2), and(5R,8R,9R,10R,11S,12R,13R,14S,17S,18S)-14,17-epoxy-28-norlupa-11,12-oxidotaraxerone(3) through the high-resolution electrospray ionization mass spectrometry(HR-ESI-MS), infrared(IR), ultraviolet(UV), nuclear magnetic resonance(NMR), and single-crystal X-ray diffraction techniques as well as comparison with literature data. Compounds 1-3 were C-28 nortriterpenoids and isolated from mastic for the first time, and compounds 1-2 were new ones.
View Article and Find Full Text PDFFitoterapia
September 2025
Key Laboratory of Medicinal Chemistry for Natural Resource, Ministry of Education, Yunnan Characteristic Plant Extraction Laboratory Co., Ltd., Yunnan Key Laboratory of Research and Development for Natural Products, School of Chemical Science and Technology, School of Pharmacy, and School of Life Sc
Five previously undescribed clerodane diterpenoids named calintegerinoids A-E (1-5), featuring 5/6 and 6/6 fused ring systems, were isolated from Callicarpa integerrima. Their structures were determined using modern spectroscopic techniques, including NMR, HR-ESI-MS, IR, UV, specific rotations, and ECD, supplemented by quantum chemical calculations and DP4+ analysis. Compared with the standard drug Andrographolide (IC 8.
View Article and Find Full Text PDFFitoterapia
August 2025
Heilongjiang University of Chinese Medicine, Harbin 150040, China; Traditional Chinese Medicine Biological Genetics, Heilongjiang Province Double First-Class Construction Interdiscipline, Harbin 150040, China. Electronic address:
Three undescribed SNTs, schisaterpene SU (1-3), were isolated from the extract of Schisandra chinensis. Their structures were elucidated on the basis of HR-ESI-MS, NMR data and ECD calculation. All compounds were evaluated for their Neuroprotective activity induced by MPP in SH-SY5Y cells.
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August 2025
Jiangxi Province Key Laboratory of Natural and Biomimetic Drugs Research, College of Pharmacy, Jiangxi Normal University, Nanchang 330022, PR China. Electronic address:
Fourteen specialized metabolites, including four previously undescribed ambuic acid derivatives (compounds 1-4) and an unreported caryophyllene-type sesquiterpenoid (compound 5), were isolated and characterized from the endophytic fungus Pestalotiopsis chamaeropis associated with the medicinal plant Artemisia selengensis. Their structures were elucidated through comprehensive spectroscopic analysis (NMR, HR-ESI-MS) and electronic circular dichroism (ECD) calculations. Anti-inflammatory activity screening against LPS-stimulated RAW 264.
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