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The genus is considered to be the most widespread and abundant group of nitrite-oxidizing bacteria in many natural and man-made ecosystems. However, the ecophysiological versatility within this phylogenetic group remains highly understudied, mainly due to the lack of pure cultures and genomic data. To further expand our understanding of this biotechnologically important genus, we analyzed the high quality draft genome of "" strain BS10, a sublineage II that was isolated from a municipal wastewater treatment plant in Hamburg, Germany. The genome of "" has a size of 3,756,190 bp and contains 3968 genomic objects, of which 3907 are predicted protein-coding sequences. Thorough genome annotation allowed the reconstruction of the "" core metabolism for energy conservation and carbon fixation. Comparative analyses indicated that most metabolic features are shared with and "", despite their ecological niche differentiation and phylogenetic distance. In conclusion, the genome of "" provides important insights into the genomic diversity of the genus and provides a foundation for future comparative genomic studies that will generate a better understanding of the nitrification process.
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http://dx.doi.org/10.1186/s40793-018-0338-7 | DOI Listing |
Curr Microbiol
September 2025
Department of Integrative Biotechnology, Sungkyunkwan University, Natural Science Campus, 2066 Seobu-ro, Jangan-Gu, Suwon-Si, Gyeonggi-Do, 16419, Republic of Korea.
A novel bacterial strain, SM-13 was isolated from the rhizospheric soil of Epipremnum aureum (Jade Pothos) sampled in Suwon, Republic of Korea. The isolate was Gram-stain-negative, aerobic, motile, rod-shaped, cream-coloured, oxidase- and catalase-positive. Strain SM-13 grew at the range of 15-37 °C (optimum, 25 °C), at pH 6.
View Article and Find Full Text PDFG3 (Bethesda)
September 2025
INRAE, UR629 URFM, Ecologie des Forêts Méditerranéennes, Site Agroparc, Domaine Saint Paul, F-84914 Avignon Cedex 9, France.
Symphonia globulifera (Clusiaceae) has emerged as a model organism in tropical forest ecology and evolution due to its significant ecological role and complex biogeographical history. Originating from Africa, this species has independently colonized Caribbean, Central and South America three times, becoming a key component of tropical ecosystems across these regions. Despite the ecological importance of S.
View Article and Find Full Text PDFInt Microbiol
September 2025
Department of Microbiology, The University of Burdwan, Bardhaman, West Bengal, 713104, India.
Biofilm formation and other virulence phenotypes under quorum sensing regulation play a vital role in the pathogenicity of Aeromonas hydrophila, triggering the emergence of multi-drug resistance (MDR) which increases fish mortality, environmental issues, and economic loss in aquaculture, necessitating the discovery of novel drugs to bypass standard antibiotics. Here, quorum quenching (QQ) may be a sustainable anti-virulent approach. β-Lactamase enzyme obtained from Chromohalobacter sp.
View Article and Find Full Text PDFMicrobiol Resour Announc
September 2025
School of Biological Sciences, Queen's University Belfast, Belfast, United Kingdom.
We report the draft genome sequence of iso11, a polypropylene-degrading bacterium isolated from a peat bog in Northern Ireland. Sequencing identified a 5,845,760 bp genome with 67.98% GC content, and annotation revealed several genes associated with hydrocarbon and plastic biodegradation, highlighting its potential for their bioremediation.
View Article and Find Full Text PDFMicrobiol Resour Announc
September 2025
Chair of Microbiology, Technical University of Munich, Freising, Germany.
The only two commercially available strains of were cultivated and their genomes sequenced. As recurring beer spoiling bacteria, they cause unwanted turbidity and unpleasant odors. Their genomes harbor a number of putative defense mechanisms explaining their much-needed resilience to survive in the brewing environment.
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