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New transcripts generated by RNA polymerase II (RNAPII) are generally processed in order to form mature mRNAs. Two key processing steps include a precise cleavage within the 3' end of the pre-mRNA, and the subsequent polymerization of adenosines to produce the poly(A) tail. In yeast, these two functions are performed by a large multi-subunit complex that includes the Cleavage Factor IA (CF IA). The four proteins Pcf11, Clp1, Rna14 and Rna15 constitute the yeast CF IA, and of these, Pcf11 is structurally the least characterized. Here, we provide evidence for the binding of two Zn2+ atoms to Pcf11, bound to separate zinc-binding domains located on each side of the Clp1 recognition region. Additional structural characterization of the second zinc-binding domain shows that it forms an unusual zinc finger fold. We further demonstrate that the two domains are not mandatory for CF IA assembly nor RNA polymerase II transcription termination, but are rather involved to different extents in the pre-mRNA 3'-end processing mechanism. Our data thus contribute to a more complete understanding of the architecture and function of Pcf11 and its role within the yeast CF IA complex.
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http://dx.doi.org/10.1093/nar/gkx674 | DOI Listing |
Am J Hum Genet
September 2025
Department of Clinical Genetics, Erasmus MC, University Medical Center Rotterdam, PO Box 2040, Rotterdam 3000 CA, the Netherlands.
Microtubule-actin cross-linking factor 1 (MACF1) is a large protein of the spectraplakin family, which is essential for brain development. MACF1 interacts with microtubules through the growth arrest-specific 2 (Gas2)-related (GAR) domain. Heterozygous MACF1 missense variants affecting the zinc-binding residues in this domain result in a distinctive cortical and brain stem malformation.
View Article and Find Full Text PDFPlant Physiol Biochem
August 2025
School of Landscape Architecture, Beijing Forestry University, Beijing, 100083, China; Beijing Key Laboratory of Ornamental Plants Germplasm Innovation & Molecular Breeding, National Engineering Research Center for Floriculture, And Laboratory of Urban and Rural Ecological Environment, Beijing, 1000
Four PLATZ family members were identified in the petals of herbaceous peony (Paeonia lactiflora), all of which contained two typical domains, BBOX and PLATZ. Notably, PlPLATZ5 was up-regulated during the transition from flowering to senescence, exhibited high expression in floral organs, and was localized to the nucleus, as revealed by subcellular localization analysis. Transient overexpression of PlPLATZ5 in P.
View Article and Find Full Text PDFFront Immunol
August 2025
West Bengal State Council of Science and Technology, Department of Science and Technology and Biotechnology, Kolkata, India.
In the era of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), the application of zinc has increased worldwide. It has the potential to increase the body's antioxidant status and provide better immune makeup. Currently, zinc is indiscriminately used as a therapeutic agent, and this creates an unwanted antagonism with the other interacting micronutrients that are present in the gut and causes secondary deficiencies of other critical micronutrients, which often leads to various complications.
View Article and Find Full Text PDFJ Bacteriol
August 2025
Laboratory of Respiratory and Special Pathogens, Division of Bacterial, Parasitic, and Allergenic Products, Center for Biologics Evaluation and Research, Food and Drug Administration, Silver Spring, Maryland, USA.
Unlabelled: Zinc is a critical nutrient for all living organisms, including bacterial pathogens such as , the causative agent of the severe human respiratory disease diphtheria. As such, zinc acquisition is essential for many pathogens to cause disease. We previously showed that the zinc-regulated ABC transporter encoded by the locus is one of several zinc uptake systems that support the growth of in zinc-limited medium.
View Article and Find Full Text PDFSheng Wu Gong Cheng Xue Bao
July 2025
College of Horticulture, Nanjing Agricultural University, Nanjing 210095, Jiangsu, China.
The plant AT-rich sequence and zinc-binding protein (PLATZ) family is composed of plant-specific zinc finger-like transcription factors, which play important roles in plant growth, development, and stress tolerance. In this study, to gain a better understanding of the PLATZ gene in . and elucidate its response under drought and high temperature conditions, the PLATZ gene family of the .
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