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More than 200 direct CodY target genes in Staphylococcus aureus were identified by genome-wide analysis of in vitro DNA binding. This analysis, which was confirmed for some genes by DNase I footprinting assays, revealed that CodY is a direct regulator of numerous transcription units associated with amino acid biosynthesis, transport of macromolecules, and virulence. The virulence genes regulated by CodY fell into three groups. One group was dependent on the Agr system for its expression; these genes were indirectly regulated by CodY through its repression of the agr locus. A second group was regulated directly by CodY. The third group, which includes genes for alpha-toxin and capsule synthesis, was regulated by CodY in two ways, i.e., by direct repression and by repression of the agr locus. Since S. aureus CodY was activated in vitro by the branched chain amino acids and GTP, CodY appears to link changes in intracellular metabolite pools with the induction of numerous adaptive responses, including virulence.
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http://dx.doi.org/10.1128/JB.00220-10 | DOI Listing |
J Mol Biol
September 2025
CHU Sainte-Justine Research Center, University of Montreal, Montreal, Quebec, Canada. Electronic address:
Chromodomain Helicase DNA-binding (CHD) proteins compose a family of chromatin remodelers that play crucial roles in DNA repair and gene expression regulation, neural stem cell differentiation and chromatin integrity. Genetic variants in CHD chromatin remodelers are associated with neurodevelopmental disorders with features like autism spectrum disorder and intellectual disability. Consequently, the determination of variant pathogenicity in clinical genetic tests for individuals bearing CHD variants is crucial.
View Article and Find Full Text PDFAnal Biochem
November 2025
Cancer Innovation Laboratory, Center for Cancer Research, National Cancer Institute, National Institutes of Health, P.O. Box B, Frederick, MD, 21702, USA. Electronic address:
Cis-aconitate decarboxylase (ACOD1) is a key enzyme converting cis-aconitate to itaconate, which has therapeutic potential for inflammatory diseases. Existing methods to measure ACOD1 activity and itaconate are often expensive and complex. We developed a novel, high-throughput spectrophotometric assay using the Fürth-Herrmann reaction.
View Article and Find Full Text PDFEcology
June 2025
Haub School of the Environment and Natural Resources, University of Wyoming, Laramie, Wyoming, USA.
Increasingly, climate change is pushing species to the limits of their thermal tolerance, with cascading effects across ecosystems. Animals use behavior to prevent these harmful physiological states, but their need and ability to do so varies with their traits. Within species, traits such as sex and reproductive status affect heat sensitivity, perhaps eliciting differences in behavioral responses to thermal extremes.
View Article and Find Full Text PDFEur J Neurosci
June 2025
Department of Pharmacology and Physiology, George Washington University School of Medicine and Health Sciences, Washington, DC, USA.
Dysregulation of the mesolimbic reward circuitry is implicated in the pathophysiology of stress-related illnesses such as depression and anxiety. These disorders are more frequently diagnosed in females, and sex differences in the response to stress are likely to be one factor that leads to enhanced vulnerability of females. In this study, we use subchronic variable stress (SCVS), a model in which male and female mice exhibit distinct behavioral, transcriptional, and immunological alterations, to investigate sexually divergent mechanisms of regulation of the ventral tegmental area by stress.
View Article and Find Full Text PDFJ Child Adolesc Trauma
June 2025
STRYV365 Inc., Milwaukee, WI USA.
Purpose: Positive childhood experiences build a sense of belonging and connection and predict school success and wellness. The peak team curriculum creates positive childhood experiences to build resilient mindsets and relationships for youth struggling with toxic stress. The purpose of this study was to survey the strengths and needs of predominantly Black students, grades 4-7, in a public charter school and to evaluate the impact of This research is crucial due to the high levels of toxic stress faced by these students, which can significantly impact their academic and emotional development.
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