Publications by authors named "Hyang Burm Lee"

Freshwater ascomycetes are fungi that play an important role in the decomposition of submerged plant debris in freshwater habitats. At present, approximately 3000 species of ascomycetes have been described from freshwater habitats. However, the number of fungi in freshwater habitats in South Korea is small, and many species are still completely unknown.

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The use of feature-based molecular networking (FBMN) for metabolomic analysis of the fungal strain sp. CNUFC-EML-48 resulted in the isolation of 17 secondary metabolites. These included four new sesquiterpene-proline conjugates, aculenamides A-D (-), and six new phenalenones (-).

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The genus belonging to order , comprises known wood pathogens that cause sapstain in timbers and wood degradation. However, this genus has been scarcely studied in Korea. Therefore, the current study was conducted to investigate the genus in freshwater environments as new habitat in Korea.

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Three novel bacterial strains, 172403-2, BT310 and BT731, were isolated from UV-irradiated soil samples collected in South Korea. All strains are Gram-negative, aerobic, non-motile and grow at 20-35 °C, optimally at 30 °C and pH 7.0.

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Autophagy is a primary cellular mechanism that entails the degradation and recycling of impaired or redundant cellular constituents. It plays an essential role in maintaining cellular health and homeostasis. Dysfunction in autophagy has been implicated in a wide range of diseases, including cancer, cardiovascular diseases, and neurodegenerative diseases.

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is the most species-rich phylum of basal lineage fungi with a worldwide distribution. Its species constitute essential components of freshwater ecosystems. However, the diversity of this group in Korea remains understudied.

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During an investigation of fungi of the orders and in Korea, a new species, sp. nov., and three new records, , , and , were found in soil and freshwater samples.

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A survey of fungal diversity in soil and freshwater habitats in Korea isolated several species of the class . Morphological characteristics and multigene phylogenetic analyses showed that these species represented new records for Korea. Herein, we report the descriptions, illustrations, and molecular phylogeny of 19 species previously undescribed in Korea, including , , , , , , , , , , , , , , , , , , and

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Eurotiales fungi are thought to be distributed worldwide but there is a paucity of information about their occurrence on diverse substrates or hosts and at specific localities. Some of the Eurotiales, including Aspergillus and Penicillium species, produce an array of secondary metabolites of use for agricultural, medicinal, and pharmaceutical applications. Here, we carried out a survey of the Eurotiales in South Korea, focusing on soil, freshwater, and plants (dried persimmon fruits and seeds of Perilla frutescens, known commonly as shiso).

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Article Synopsis
  • Dimorphism is a phenomenon where certain fungi can switch between yeast and filamentous forms depending on temperature, which is explored in the study of a new mucoralean fungus isolated from a patient with Burkitt lymphoma.
  • The fungus shows significant changes in shape and structure at body temperature, resembling traditional yeast forms but still having unique features that can help differentiate it from other similar fungi in clinical settings.
  • Accurate and timely diagnosis is crucial for managing mucormycosis, as different fungal species have varied responses to antifungal treatments, highlighting the need to recognize these dimorphic transitions to improve patient outcomes.
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A novel filamentous actinobacterium designated strain 4-36 showing broad-spectrum antifungal activity was isolated from a coal mining site in Mongolia, and its taxonomic position was determined using polyphasic approach. Optimum growth occurred at 30 °C, pH 7.5 and in the absence of NaCl.

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is a relatively large order of , well-known for their ability to produce secondary metabolites with potential beneficial applications. To understand their diversity and distribution, different environmental sources including soil, freshwater, insect, and indoor air were investigated. Eight strains of were isolated and identified based on their morphological characters and a multi-gene phylogenetic analysis of the ITS, , , and regions.

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is a genus within the phylum (class , order , family ). Many species in this genus are known to produce diverse secondary metabolites with great potential for agricultural, medical, and pharmaceutical applications. During a survey on fungal diversity in the genus in Korea, six strains were isolated from soil, indoor air, and freshwater environments.

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Axl is a tyrosine kinase receptor, a negative regulator for innate immune responses and inflammatory bowel disease (IBD). The gut microbiota regulates intestinal immune homeostasis, but the role of Axl in the pathogenesis of IBD through the regulation of gut microbiota composition remains unresolved. In this study, mice with DSS-induced colitis showed increased Axl expression, which was almost entirely suppressed by depleting the gut microbiota with antibiotics.

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A novel Gram-stain-negative, aerobic, rod-shaped, non-motile, cream-coloured strain (G124) was isolated from ginseng soil collected in Yeongju, Republic of Korea. Phylogenetic analysis based on 16S rRNA gene sequences revealed that strain G124 belongs to a distinct lineage within the genus (family , order and class ). Strain G124 was closely related to THG-T61 (98.

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Species of are important opportunistic fungal pathogens in the order that are isolated from various sources such as soil, indoor air, food products, feces, and decaying vegetables. In recent years, species of have become an emerging causative agent of invasive mucormycosis. In Europe and USA, are the second and third most common causal fungus of mucormycosis, respectively.

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Two strains, YP344 and YP579 were isolated from soil samples in Pocheon City, Gyeonggi Province, South Korea. The strains YP344 and YP579 belong to the genus and , respectively. The molecular phylogenetic analysis showed that the strain YP344 was closely related to Strain YP344 differed by four nucleotide substitutions with no gap (0.

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The fungal-like family (), also called "water mold," includes mostly aquatic saprophytes as well as notorious aquatic animal pathogens. Most studies on have been biased toward pathogenic species that are important to aquaculture rather than saprotrophic species, despite the latter's crucial roles in carbon cycling of freshwater ecosystems. Few attempts have been made to study the diversity and ecology of ; thus, their ecological role is not well-known.

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Two novel bacterial strains BT178 and BT635 were isolated from soil collected in Gyeonggi province, Republic of Korea. Both strains were Gram-negative, rod-shaped circular, and had convex, glistening, pink-colored colonies. Phylogenetic analysis based on 16S rRNA gene sequences showed that each of the strains BT178 and BT635 formed an individual lineage within the genus Hymenobacter (family Hymenobacteraceae, order Cytophagales, class Cytophagia, phylum Bacteroidetes).

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During a survey of from a forest located in Pernambuco state, Brazil, two new species were discovered and described based on morphological and molecular data (internal transcribed spacer and large subunit ribosomal DNA sequences). Both species were characterized as unbranched sporangiophores and sporangia with columellae of varied shapes forming. Multispored sporangiola were frequent, whereas unispored sporangiola were rare.

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An investigation of species of the genus present in arthropod, freshwater, and soil led to the discovery of seven undescribed species in Korea. Based on their morphological characteristics and molecular phylogeny analyses using a combined data set of β-tubulin () and calmodulin () sequences, the isolated strains CNUFC IGS2-5, CNUFC YJ1-19, CNUFC WD27, CNUFC U8-70, CNUFC AS2-24, CNUFC S32-1, and CNUFC U7-48, were identified as , . , .

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Species in the genus have a worldwide distribution and are isolated from various substrata and hosts, including soil, dung, freshwater, and fruits. However, their diversity from insects is still much too little explored. The aim of this study was to characterize three new species of : sp.

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Invasive aspergillosis is a critical complication in immunocompromised patients with hematologic malignancies or with viral pneumonia caused by influenza virus or SARS‑CoV‑2. Although early and accurate diagnosis of invasive aspergillosis can maximize clinical outcomes, current diagnostic methods are time-consuming and poorly sensitive. Here, we assess the ability of 2-deoxy-2-F-fluorosorbitol (F-FDS) positron emission tomography (PET) to specifically and noninvasively detect Aspergillus infections.

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During a survey of plant-inhabiting fungi and water niches from Korea, noteworthy fungi were collected; among them, two new species, sp. nov. and sp.

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During a survey of fungal diversity associated with insects, mud, soil, and freshwater niches in different areas in Korea, nine interesting fungal strains were isolated. Based on their morphological characteristics and molecular phylogeny analyses, using a combined data set of β-tubulin (), calmodulin (), and second largest subunit of RNA polymerase () sequences, the strains CNUFC AM-44, CNUFC JCW3-4, CNUFC S708, CNUFC WT202, CNUFC AS1-29, CNUFC JCW3-5, CNUFC JDP37, and CNUFC JDP62 were identified as , , , , . , , , and .

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