Publications by authors named "Cheng-Bin Chen"

Using 3-stage pooled-plasma hepatitis C virus (HCV) RNA testing performed quarterly among at-risk people with human immunodeficiency virus (PWH), we found that if testing had been performed every 6 or 12 months, 58.6%-91.7% of PWH who recently acquired HCV would be delayed for diagnosis and might contribute to onward HCV transmission with longer durations.

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  • Parallel speciation indicates that natural selection plays a significant role, but it's not well-documented across many species.
  • Researchers studied the wild rice species Oryza nivara and its origin from O. rufipogon, revealing that O. nivara arose multiple times from different populations.
  • The study showed that O. nivara populations developed similar traits due to adapting to dry habitats, leading to reproductive isolation primarily influenced by flowering time as a key trait.
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A novel gold-catalyzed 6-exo-dig cycloisomerization of o-propargylbiaryls has been developed that provides ready access to functionalized phenanthrenes in largely good to excellent yields. Notable features of this method are readily available starting materials, mild reaction conditions, and broad substrate scope.

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A concise gold-catalyzed method for the preparation of anthracenes from o-alkynyldiarylmethanes has been developed. Under mild reaction conditions, versatile anthracene derivatives were formed in moderate to good yields. The high flexibility, broad substrate scope, and mild nature of this reaction render it a viable alternative for the synthesis of anthracenes.

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  • The study investigates the molecular mechanisms of heterosis in Larix breeding by analyzing gene expression profiles in two genotypes and their reciprocal hybrids using microarrays.
  • One hybrid exhibited significant heterosis with 1,171 differentially expressed genes, while the other did not show heterosis with 939 differentially expressed genes.
  • The findings suggest that nonadditive gene expression may play a crucial role in heterosis, as the heterotic hybrid had more nonadditive genes linked to vital biological functions compared to the non-heterotic hybrid.
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Polyploidization is known to accompany altered DNA methylation in higher plants, which plays an important role in gene expression regulation and maintaining genome stability. While the characteristics of DNA methylation in different polyploid plants are still to be elucidated; here, status of genomic DNA methylation in a series of diploid, triploid, and tetraploid annual herbaceous plants (watermelon and ) and woody perennials (pear, , and loquat) were explored by methylation-specific amplified polymorphism analysis. The results indicated that levels of DNA methylation in triploid watermelon and were lower than their diploid parents.

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The aim of the study was the explain the mechanism related to therapeutic effects of Uremic Clearance Granules (Niaoduqing Keli in Chinese) on adenine-induced Chronic Renal Failure in rats. Thirty 8-week-old male Wistar rats were selected and randomly divided in to 3 groups: Normal Control Group (NCG)consisted of 10 rats, Chronic Renal Failure Pathological Control Group (PCG) 10 rats, and Uremic Clearance Granules Treatment Group (UCG) 10 rats. Each rat in PCG and UCG was fed with adenine-enriched diets, containing 10 g adenine per kg food for 6 weeks.

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DNA methylation is one of the major epigenetic modifications. It is very important to the regulation of gene expression. In present study, an autoploidy series (2x, 3x and 4x) in watermelon (Citrullus lanatus) was constructed and MSAP (Methylation-Sensitive Amplification Polymorphism) analysis was conducted to elucidate the level and pattern of DNA methylation at CCGG sites in different ploidy watermelons.

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We have used chromosome microdissection and microcloning to construct a DNA library of the entire B chromosome (B) of rye. New rye B-specific sequences have been screened from this pool, blasted with other sequences and analyzed to elucidate the characters of DNA constitution and the possible pathway of the origin of the rye B chromosome. We report the discovery of a new sequence that is specific to the rye B centromere.

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Objective: To research on genetic diversity of different Salvia miltiorrhiza geographical populations in China.

Method: The genetic diversity of 27 S. miltiorrhiza geographical populations from ten provinces in China was estimated using amplified fragment length polymorphism (AFLP) markers.

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In this study, multicolor FISH analysis on metaphase chromosomes of spinach with biotin-labeled 25S rDNA, DIG-labeled telomere sequences and biotin-labeled and DIG-labeled 5S rDNA was performed. There were six 25S rDNA loci, which were located on the satellites of the third, the fifth and the sixth chromosomes, four 5S rDNA loci, which were located on the long arms of the third and the fifth chromosomes. The telomere loci were located on the end of the sixth chromosome and also on both the end and centromeric regions of other chromosomes.

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  • The study aimed to investigate the genetic background and distribution of Pinellia ternata across 27 populations in China.
  • Researchers used cytological and cytogeographical methods to analyze the chromosomal compositions, revealing that P. ternata is a complex with various ploidy levels, including septuploid, octoploid, nonuploid, and decaploid.
  • The findings emphasize the genetic diversity and ploidy variation in P. ternata, suggesting that understanding toxicity and chemical components in different ploidy forms is critical for selecting superior plants for cultivation.
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Background: The understanding of cSNPs of cancer-related genes harboring in high frequency loss regions of tumor chromosomes can advance the disclosure of genetic and variant mechanisms of tumorigenesis, and the investigation of cancer susceptibility. In preparing a gene chip for detecting polymorphisms on coding region of genes in hepatocellular carcinoma tissues, some cSNPs are of interest for their potential links with phenotype.

Methods: The genes harboring in loss regions with high frequency of hepatocellular carcinoma (HCC) were selected, the related information of cSNP sequences was obtained from the SNP database (dbSNP) of the National Center for Biotechnology Information (NCBI).

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  • Bulked segregant analysis was utilized to find RAPD markers related to the fertility gene in cytoplasmic male sterile capsicum annum L.
  • A specific primer, S418, revealed a unique DNA fragment in the restorer line, which was later confirmed to be 1515 bp in size through fluorescence in situ hybridization.
  • The identified 1515 bp sequence showed low homology to known sequences but had strong similarities to rice sequences, suggesting a potential shared function and paving the way for future studies on fertility restoration mechanisms.
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  • The study aimed to create a DNA microarray to explore how traditional Chinese herbs may act against tumors.
  • Researchers constructed cDNA microarrays with probes for human cell cycle genes and tested the effects of four specific anti-hepatocarcinoma herbs on cancer cells.
  • Results showed changes in the expression of cell cycle genes after treatment with the herbs, indicating potential effects on tumor growth and opening up avenues for using DNA microarray technology in studying traditional medicine.
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The origin and evolution of B chromosomes could be explained by the specific DNA sequence on them. But the specific sequences known were quite limited. To investigate maize B chromosome sqicific DNA sequeces, maize genomes with and without B chromosomes were analyzed by AFLP.

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