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Basidiomycete fungi are the main decomposers of dead wood with an impact on the global carbon cycle. Their degradative mechanisms have been well-studied under aerobic conditions. Here, we study their activity in oxygen-depleted environments. We use metaproteomics in a field study to identify active wood-decomposing fungi and their enzymes at different depths from the wood surface, including in oxygen-depleted conditions. In vitro, we observe that the brown-rot fungus Fomitopsis pinicola can grow on wood in complete anoxia. Using C solid-state NMR, we demonstrate the degradation of plant cell-wall polysaccharides and fungal growth in the absence of oxygen. Proteomic analyses reveal that F. pinicola switches from a Fenton chemistry-based process under aerobic conditions to the secretion of plant cell wall-active enzymes in anoxia. Our finding that wood decay fungi can thrive in complete anoxia provides a deeper understanding of lignocellulose degradation mechanisms in nature and raises opportunities for the development of bio-inspired anaerobic processes.
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http://dx.doi.org/10.1038/s41467-025-62567-3 | DOI Listing |
Appl Environ Microbiol
September 2025
Course in Molecular Biology, Division of Biosphere Science, Graduate School of Environmental Science, Hokkaido University, Sapporo, Japan.
The model wood-decaying basidiomycete has been extensively studied to elucidate the molecular mechanisms of wood decomposition. However, genetic studies have been limited by the lack of adequate genetic tools. Here, we established an antimetabolite-based transformation system, originally developed for ascomycetes, for use in .
View Article and Find Full Text PDFMycoKeys
August 2025
School of Food and Pharmaceutical Engineering, Guizhou Institute of Technology, Guiyang 550003, China School of Food and Pharmaceutical Engineering, Guizhou Institute of Technology Guiyang China.
is a genus of helicosporous hyphomycetes distinguished by a high degree of morphological variation in its asexual morphs. During an investigation of helicosporous fungi in tropical regions, four fungal strains were isolated from submerged decaying wood in Hainan Province, southern China. Multigene phylogenetic analyses based on a combined ITS-LSU- sequence dataset were conducted to determine the phylogenetic placement of the four fungal strains, which showed two distinct new species.
View Article and Find Full Text PDFPLoS One
September 2025
Faculty of Engineering, University of Nottingham, Nottingham, United Kingdom.
Biochar is a carbon-rich material produced via pyrolysis that is increasingly recognized for its role in carbon sequestration, particularly through its application in agriculture and materials. However, accurately predicting the long-term persistence of biochar in the environment remains challenging. While incubation trials have been widely used to assess biochar degradation, their extrapolation beyond centennial timescales is uncertain.
View Article and Find Full Text PDFMicroorganisms
July 2025
Provincial Key Laboratory of Conservation Biology, School of Forestry, Jiangxi Agricultural University, Nanchang 330045, China.
Deadwood is essential for the forest ecosystem productivity and stability. A growing body of evidence indicates that deadwood-inhabiting microbes are effective decomposition agents, yet little is known about how changes in microbial communities during the initial deadwood decay. In a small forest area, we performed dense sampling from the top, middle, and bottom portions of two representative cultivars logs to track deadwood xylem microbiota shift during the initial deadwood decay.
View Article and Find Full Text PDFJ Microbiol Biotechnol
August 2025
Shandong Province Key Laboratory of Applied Mycology, College of Life Sciences, Qingdao Agricultural University, Qingdao 266109, P.R. China.
Wood-decay fungi, particularly those within the genus, have attracted considerable interest due to their diverse bioactivities, including antitumor, immune-modulatory, anti-inflammatory, antiviral, antioxidant, and antibacterial effects. This study conducted a comparative analysis of the antitumor activities and underlying molecular mechanisms of two species, and , from Shandong Province. assays demonstrated that ethanol extract from the two species exhibited significant, time- and concentration-dependent inhibition of breast cancer (MCF-7), esophageal cancer (Eca-109), and human non-small cell lung cancer (A549).
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