Category Ranking
98%
Total Visits
921
Avg Visit Duration
2 minutes
Citations
20
Article Abstract
Potato virus S (PVS) is a widely distributed potato pathogen that typically causes mild or asymptomatic infections. Still, certain genotypes can cause up to 20% yield losses, especially when co-infected with other viruses. Aphids are the only currently recognized insect vectors of PVS; however, the mechanical transmission through plant contact is also known. The Colorado potato beetle (CPB) is a major potato pest. In this study, we report the partial PVS genome assembled from the RNA-seq data obtained from CPB field samples and the phylogenetic analysis of its triple gene block (TGB) nucleotide sequence with corresponding sequences, extracted from published PVS genomes and PVS genomes assembled from publicly available CPB RNA-Seq data. The CPB-derived PVS sequences clustered within the globally prevalent PVS phylogroup, indicating they are typical PVS strains rather than a highly divergent variant. These results demonstrate the wide presence of PVS genetic material in CPB. With the emerging PVS variants showing increased transmissibility and pathogenicity, PVS could be considered an underappreciated potato pathogen and thus further studies are needed to determine whether CPB may play a role in PVS transmission.
Download full-text PDF |
Source |
|---|---|
| http://dx.doi.org/10.1007/s11262-025-02179-7 | DOI Listing |
Publication Analysis
Top Keywords
Similar Publications
Observational and Experimental Evidence on the Interaction Between Fine Particulate Matter and Shared Genetic Variants Across Atherosclerotic Cardiovascular Disease Subtypes.
Circ Genom Precis Med
September 2025
Department of Epidemiology, School of Public Health, Sun Yat-sen University, Guangzhou, China (J.Z., S.R., L.C., M.C., F.T., B.A., Y.Y., H.L.).
Background: Previous studies have suggested that the associations between ambient air pollution and atherosclerotic cardiovascular diseases (ASCVD) differ by genotype. A genome-wide approach provides a more comprehensive understanding of this relationship on a genomic scale.
Methods: Using data from ≈300 000 UK Biobank participants, we conducted a genome-wide interaction analysis on 10 745 802 variants.
Assessment of genomic prediction capabilities of transcriptome data in a barley multi-parent RIL population.
Theor Appl Genet
September 2025
Institute for Breeding Research on Agricultural Crops, Julius Kühn Institute (JKI) - Federal Research Centre for Cultivated Plants, Sanitz, 18190, Germany.
Low-cost and high-throughput RNA sequencing data for barley RILs achieved GP performance comparable to or better than traditional SNP array datasets when combined with parental whole-genome sequencing SNP data. The field of genomic selection (GS) is advancing rapidly on many fronts including the utilization of multi-omics datasets with the goal of increasing prediction ability and becoming an integral part of an increasing number of breeding programs ensuring future food security. In this study, we used RNA sequencing (RNA-Seq) data to perform genomic prediction (GP) on three related barley RIL populations.
View Article and Find Full Text PDFDysregulated RNA splicing impairs regeneration in alcohol-associated liver disease.
Nat Commun
September 2025
Department of Biochemistry, University of Illinois, Urbana-Champaign, IL, USA.
Individuals with progressive liver failure risk dying without liver transplantation. However, our understanding of why regenerative responses are disrupted in failing livers is limited. Here, we perform multiomic profiling of healthy and diseased human livers using bulk and single-nucleus RNA- and ATAC-seq.
View Article and Find Full Text PDFIntegrated single-cell atlas of human atherosclerotic plaques.
Nat Commun
September 2025
Institute of Computational Biology, German Research Center for Environmental Health, Helmholtz Zentrum München, Neuherberg, Germany.
Atherosclerosis, a major cause of cardiovascular diseases, is characterized by the buildup of lipids and chronic inflammation in the arteries, leading to plaque formation and potential rupture. Despite recent advances in single-cell transcriptomics (scRNA-seq), the underlying immune mechanisms and transformations in structural cells driving plaque progression remain incompletely defined. Existing datasets often lack comprehensive coverage and consistent annotations, limiting the utility of downstream analyses.
View Article and Find Full Text PDFMapping multitissue regulatory variants reveals a liver-centric coexpression network associated with duck egg-laying performance.
Genome Res
September 2025
College of Life Science, Sichuan Agricultural University, Ya'an, 625014, People's Republic of China;
Poultry egg production is shaped by the intertwined action of multiple physiological systems, greatly magnifying the complexity of its underlying genetic regulation. Although multitissue mapping of regulatory variants offers a powerful route to untangle this complexity, comprehensive data sets in ducks remain scarce. Meanwhile, the contributions of peripheral systems beyond neuroendocrine regulation on poultry egg production are still largely unexplored.
View Article and Find Full Text PDF