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http://dx.doi.org/10.1111/pce.70087 | DOI Listing |
Plant Cell Environ
July 2025
College of Life sciences, Henan Agricultural University, Zhengzhou, China.
J Biol Chem
August 2025
The Feinberg School of Medicine, Northwestern University, Chicago, Illinois, USA; Jesse Brown VA Medical Center, Chicago, Illinois, USA; Lurie Cancer Center, Northwestern University, Chicago, Illinois, USA. Electronic address:
Increased expression of a set of homeodomain transcription factors, including HoxA10, characterizes an adverse prognosis subtype of acute myeloid leukemia (AML). Examples of this subtype include AML with KMT2A or MYST3/CREBBP gene rearrangements, and an AML subset with normal cytogenetics. Previously, we identified ARIH2, the gene encoding Triad1, as a HoxA10 target gene.
View Article and Find Full Text PDFNat Methods
June 2025
Basic Sciences Division and Computational Biology Section of the Public Health Sciences Division, Fred Hutchinson Cancer Center, Seattle, WA, USA.
RNAs undergo a complex choreography of metabolic processes that are regulated by thousands of RNA-associated proteins. Here we introduce ReLiC, a scalable and high-throughput RNA-linked CRISPR approach to measure the responses of diverse RNA metabolic processes to knockout of 2,092 human genes encoding all known RNA-associated proteins. ReLiC relies on an iterative strategy to integrate genes encoding Cas9, single-guide RNAs (sgRNAs) and barcoded reporter libraries into a defined genomic locus.
View Article and Find Full Text PDFProc Natl Acad Sci U S A
April 2025
Department of Chemistry, Institute for Biochemistry and Molecular Biology, University of Hamburg, Hamburg 20146, Germany.
The integrated stress response (ISR) is a central signaling network that enables eukaryotic cells to respond to a variety of different environmental stresses. Such stresses cause ribosome collisions that lead to activation of the kinase Gcn2, resulting in the phosphorylation and inactivation of eukaryotic initiation factor 2 and thereby promoting selective translation of mRNAs to restore homeostasis. Despite the importance of the ISR and intensive study over the past decades, structural insight into how Gcn2 interacts with ribosomal particles has been lacking.
View Article and Find Full Text PDFCancer Cell Int
March 2025
Department of Gastroenterology, Institute of Liver and Gastrointestinal Diseases, Tongji Hospital, Tongji Medical College, Huazhong University of Science and Technology, 1095 Jiefang Avenue, Wuhan, Hubei, 430000, China.
Background: General control non-derepressible protein 1 (GCN1), a ribosome-binding protein, has been implicated in the development and progression of multiple cancers. However, the potential role of GCN1 in hepatocellular carcinoma (HCC) has not yet been investigated.
Methods: The expression of GCN1 in HCC was analyzed using multiple databases.