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Article Abstract
Here, we present a computational framework, E3RC, for exploring enhancer RNA (eRNA) expression and regulation using conventional RNA sequencing (RNA-seq) data. Using a public dataset as an example, we describe step-by-step guidelines for identifying eRNAs and characterizing their expressional changes and transcriptional regulation across multiple developmental stages of mouse preimplantation embryos. For complete details on the use and execution of this protocol, please refer to Yu et al..
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| http://www.ncbi.nlm.nih.gov/pmc/articles/PMC12318280 | PMC |
| http://dx.doi.org/10.1016/j.xpro.2025.103989 | DOI Listing |
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