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Bacterial ice nucleating proteins (INPs) are exceptionally effective in promoting the kinetically hindered transition of water to ice. Their efficiency relies on the assembly of INPs into large functional aggregates, with the size of ice nucleation sites determining activity. Experimental freezing spectra have revealed two distinct, defined aggregate sizes, typically classified as class A and C ice nucleators (INs). Despite the importance of INPs and years of extensive research, the precise number of INPs forming the two aggregate classes, and their assembly mechanism have remained enigmatic. Here, we report that bacterial ice nucleation activity emerges from more than two prevailing aggregate species and identify the specific number of INPs responsible for distinct crystallization temperatures. We find that INP dimers constitute class C INs, tetramers class B INs, and hexamers and larger multimers are responsible for the most efficient class A activity. We propose a hierarchical assembly mechanism based on tyrosine interactions for dimers, and electrostatic interactions between INP dimers to produce larger aggregates. This assembly is membrane-assisted: Increasing the bacterial outer membrane fluidity decreases the population of the larger aggregates, while preserving the dimers. Inversely, Dulbecco's Phosphate-Buffered Saline buffer increases the population of multimeric class A and B aggregates 200-fold and endows the bacteria with enhanced stability toward repeated freeze-thaw cycles. Our analysis suggests that the enhancement results from the better alignment of dimers in the negatively charged outer membrane, due to screening of their electrostatic repulsion. This demonstrates significant enhancement of the most potent bacterial INs.
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http://dx.doi.org/10.1073/pnas.2409283121 | DOI Listing |
Int J Syst Evol Microbiol
September 2025
State Key Laboratory of Microbial Diversity and Innovative Utilization, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, PR China.
The family , encompassing the genus and related taxa, comprises diverse Gram-negative, aerobic, rod-shaped bacteria found in varied habitats, including air, soil, water and glaciers. Recent genomic-based taxonomic revisions have reclassified some species into new genera, such as and , due to polyphyletic relationships within the family . Certain species are known for forming biofilms or functioning as aerobic anoxygenic phototrophic bacteria, traits that enhance resilience in extreme environments like the cryosphere.
View Article and Find Full Text PDFCarbohydr Polym
November 2025
Institute of Nano and Biopolymeric Materials, School of Materials Science and Engineering, Tongji University, Shanghai 201804, China. Electronic address:
This work reports an ethanol-mediated freeze-drying (EMFD) strategy that enables the scalable production of high-performance bacterial cellulose aerogels (BCAs), effectively addressing key limitations of conventional methods such as supercritical drying and standard freeze-drying, including fragility, low mechanical strength, and high cost. Specifically, by replacing water in bacterial cellulose hydrogels (BCHs) with ethanol-water solution (EWs) prior to freeze-drying, the process limits ice crystal formation and reduces capillary forces and adhesion, thereby preserving structural integrity and enhancing mechanical properties. The effects of EWs concentration on BCA morphology, volume shrinkage, mechanical strength, and pore structure were systematically investigated.
View Article and Find Full Text PDFEnviron Microbiol Rep
October 2025
Department of Biology, Marine Biology Section, University of Copenhagen, Helsingør, Denmark.
Due to climate change, sea ice more commonly retreats over the shelf breaks in the Arctic Ocean, impacting sea ice-pelagic-benthic coupling in the deeper basins. Nitrogen fixation (the reduction of dinitrogen gas to bioavailable ammonia by microorganisms called diazotrophs) is reported from Arctic shelf sediments but is unknown from the Arctic deep sea. We sampled five locations of deep-sea (900-1500 m) surface sediments in the central ice-covered Arctic Ocean to measure potential nitrogen fixation through long-term (> 280 days) stable-isotope (N) incubations and to study diazotroph community composition through amplicon sequencing of the functional marker gene nifH.
View Article and Find Full Text PDFISME J
August 2025
School of Oceanography & Astrobiology Program, University of Washington, Seattle, WA, USA.
Despite growing evidence for the role of DNA methylation in bacterial acclimation to environmental stress, this epigenetic mechanism remains unexplored in sea-ice microbial communities known to tolerate multiple stressors. This study presents a first analysis of DNA methylation patterns in bacterial communities and associated viruses across the vertical thickness of sea ice. Using a novel stepped-sackhole method, we collected sea-ice brines from distinct horizons of an Arctic ice floe, capturing microbial communities that had been exposed to different environmental conditions.
View Article and Find Full Text PDFComp Biochem Physiol C Toxicol Pharmacol
December 2025
School of Urban Planning and Design, Peking University Shenzhen Graduate School, Shenzhen 518055, China. Electronic address:
Environmental transport pathways of antibiotics resemble those of surfactants, and the two often co-exist in aqueous environments, represent a significant ecological risk. Although the individual toxicities of these chemicals are well-documented, their combined effects and the corresponding mixture predicted no-effect concentrations (PNECs) have not been adequately investigated. This study examined the combined toxicity of fluoroquinolone antibiotics (levofloxacin (LEV) and enrofloxacin (ENR)) and nonionic surfactant (octylphenol ethoxylate (TritonX-100)) through acute toxicity tests on Daphnia magna, a widely used model organism for freshwater toxicity assessment due to its high sensitivity to pollutants and ecological relevance.
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